RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MT-ND4LP03901 98 aa15.3■□□□□ 0.04
TRAM1-201ENST00000262213 SMIM6P0DI80 62 aa15.3■□□□□ 0.04
TRAM1-201ENST00000262213 THBS4P35443 961 aa15.3■□□□□ 0.04
TRAM1-201ENST00000262213 TMEM176BQ3YBM2 270 aaPredicted RBP15.3■□□□□ 0.04
TRAM1-201ENST00000262213 OGFOD3Q6PK18 319 aa15.3■□□□□ 0.04
TRAM1-201ENST00000262213 CRIP3Q6Q6R5 217 aa15.3■□□□□ 0.04
TRAM1-201ENST00000262213 LIME1Q9H400 295 aa15.3■□□□□ 0.04
TRAM1-201ENST00000262213 NPIPB13A6NJU9 1138 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 ZNF850A8MQ14 1090 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 NPIPB4C9JG80 1138 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 UBE2CO00762 179 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 CLDN17P56750 224 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 SLC25A47Q6Q0C1 308 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 OR10G3Q8NGC4 313 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 ZNF251Q9BRH9 671 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 RFNGQ9Y644 331 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 DBHP09172 617 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 OR5AC1P0C628 307 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 OR5H8P0DN80 308 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 NAT2P11245 290 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 CEBPGP53567 150 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 TAF9Q16594 264 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 PLPPR5Q32ZL2 321 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 PLXDC2Q6UX71 529 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 LYZL2Q7Z4W2 148 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 UCK1Q9HA47 277 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 MIOXQ9UGB7 285 aa15.29■□□□□ 0.04
TRAM1-201ENST00000262213 RCL1Q9Y2P8 373 aaKnown RBP15.29■□□□□ 0.04
TRAM1-201ENST00000262213 COL5A1P20908 1838 aaPredicted RBP15.28■□□□□ 0.04
TRAM1-201ENST00000262213 IGHV1OR21-1A0A087WYE8 117 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 SPRY1O43609 319 aaPredicted RBP15.28■□□□□ 0.04
TRAM1-201ENST00000262213 S100A8P05109 93 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 HEXBP07686 556 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 RAB5AP20339 215 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 FAM189A2Q15884 450 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 ABCA11PQ4W5N1 156 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 MRPL38Q96DV4 380 aaKnown RBP15.28■□□□□ 0.04
TRAM1-201ENST00000262213 EGLN1Q9GZT9 426 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 GPR173Q9NS66 373 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 GAPDHP04406 335 aaKnown RBP15.28■□□□□ 0.04
TRAM1-201ENST00000262213 GLP1RP43220 463 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 NOVA1P51513 510 aaKnown RBP15.28■□□□□ 0.04
TRAM1-201ENST00000262213 FAM3AP98173 230 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 NHLH2Q02577 135 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 NCMAPQ5T1S8 102 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 RPUSD3Q6P087 351 aaKnown RBP15.28■□□□□ 0.04
TRAM1-201ENST00000262213 TMEM156Q8N614 296 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 OR5L1Q8NGL2 311 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 STARD10Q9Y365 291 aa15.28■□□□□ 0.04
TRAM1-201ENST00000262213 CRYM-AS1A6NIL9 109 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 SERPINE3A8MV23 424 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 C10orf142B7Z368 130 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 AGAP20933 346 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 PRAMEF20Q5VT98 475 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 SLC38A9Q8NBW4 561 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 CHRDQ9H2X0 955 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 C19orf12Q9NSK7 152 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 PUS1Q9Y606 427 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRAM1-201ENST00000262213 POMT1Q9Y6A1 747 aa15.27■□□□□ 0.04
TRAM1-201ENST00000262213 IGHV3-15A0A0B4J1V0 119 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 FOXI3A8MTJ6 420 aaPredicted RBP15.27■□□□□ 0.03
TRAM1-201ENST00000262213 MASP2O00187 686 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 MSTNO14793 375 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 SULT1A1P50225 295 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 TMEM182Q6ZP80 229 aaPredicted RBP15.27■□□□□ 0.03
TRAM1-201ENST00000262213 ANKRD37Q7Z713 158 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 ZNF565Q8N9K5 539 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 SSC4DQ8WTU2 575 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 LUZP4Q9P127 313 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 SDK2Q58EX2 2172 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 SHANK1Q9Y566 2161 aa15.27■□□□□ 0.03
TRAM1-201ENST00000262213 BORCS7-ASMTA0A0B4J1R7 106 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 FAM230AA0A1W2PPH8 454 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 CTSDP07339 412 aaPredicted RBP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 PRF1P14222 555 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 CCL1P22362 96 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 PPP1CCP36873 323 aaKnown RBP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 GUCA1AP43080 201 aaPredicted RBP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 PDCD1Q15116 288 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 SURF2Q15527 256 aaPredicted RBP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 UBAC2Q8NBM4 344 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 TSTD1Q8NFU3 115 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 FAM213BQ8TBF2 198 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 SPSB2Q99619 263 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 PIGQQ9BRB3 760 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 TUBD1Q9UJT1 453 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 SHISA7A6NL88 538 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 CLN5O75503 358 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 OR2J2O76002 312 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 CSNK1EP49674 416 aaKnown RBP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 POLR2GP62487 172 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 GRB2P62993 217 aaKnown RBP15.26■□□□□ 0.03
TRAM1-201ENST00000262213 BATF2Q8N1L9 274 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 OR52M1Q8NGK5 317 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 OR2AE1Q8NHA4 323 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 AKR7LQ8NHP1 331 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 KCNJ16Q9NPI9 418 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 ANXA10Q9UJ72 324 aa15.26■□□□□ 0.03
TRAM1-201ENST00000262213 EXPH5Q8NEV8 1989 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms