RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 C20orf196Q8IYI0 205 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 GJC3Q8NFK1 279 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 TM2D1Q9BX74 207 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 DMDP11532 3685 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 IGLV3-32A0A0A0MS00 114 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 JTBO76095 146 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 IFNA21P01568 189 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 IGLV3-1P01715 115 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 OR5H8P0DN80 308 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 MEOX2P50222 304 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 ZNF84P51523 738 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 DVL1P1P54792 670 aaPredicted RBP16.91■□□□□ 0.3
SCARB1-201ENST00000261693 SNRPEP62304 92 aaKnown RBP16.91■□□□□ 0.3
SCARB1-201ENST00000261693 TGIF1Q15583 401 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 TAF9Q16594 264 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 SNAI3Q3KNW1 292 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 SLC16A14Q7RTX9 510 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 DMBX1Q8NFW5 382 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 OR2AE1Q8NHA4 323 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 SPACA9Q96E40 222 aaPredicted RBP16.91■□□□□ 0.3
SCARB1-201ENST00000261693 NELFAQ9H3P2 528 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 V9GYS6 101 aa16.91■□□□□ 0.3
SCARB1-201ENST00000261693 CRYM-AS1A6NIL9 109 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 DIRAS3O95661 229 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 FHITP49789 147 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 PIGPP57054 158 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 HABP2Q14520 560 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-201ENST00000261693 UCN2Q96RP3 112 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 DEFB126Q9BYW3 111 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 RPS10P5Q9NQ39 176 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 CACFD1Q9UGQ2 172 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 MED19A0JLT2 244 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-201ENST00000261693 PQLC2LA1A4F0 135 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 XRCC2O43543 280 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 MTCP1P56278 107 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 FXYD4P59646 89 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 SLC35A1P78382 337 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 ZNF616Q08AN1 781 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 CDCP2Q5VXM1 449 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 OR9K2Q8NGE7 335 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 PP6455Q8WZ26 134 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 ZNF837Q96EG3 531 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-201ENST00000261693 SMCO4Q9NRQ5 59 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 PLEK2Q9NYT0 353 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 ANXA10Q9UJ72 324 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 TUBD1Q9UJT1 453 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 B3GALT1Q9Y5Z6 326 aa16.9■□□□□ 0.3
SCARB1-201ENST00000261693 FAM230AA0A1W2PPH8 454 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 FAM221AA4D161 298 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 ZNF850A8MQ14 1090 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 G3V3Y1 287 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 M0R135 149 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 EIF3GO75821 320 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCARB1-201ENST00000261693 CTSDP07339 412 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-201ENST00000261693 CELA2AP08217 269 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 CBR1P16152 277 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 PNLIPP16233 465 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 LSM6P62312 80 aaKnown RBP16.89■□□□□ 0.29
SCARB1-201ENST00000261693 SLC22A8Q8TCC7 542 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 ZNF799Q96GE5 643 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 C20orf24Q9BUV8 137 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 NXT1Q9UKK6 140 aaKnown RBP16.89■□□□□ 0.29
SCARB1-201ENST00000261693 HDGFL3Q9Y3E1 203 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 A0A0U1RQV5 110 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 TSPAN15O95858 294 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 MBPP02686 304 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-201ENST00000261693 CTSSP25774 331 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 MIDNQ504T8 468 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 SKA3Q8IX90 412 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 AK3Q9UIJ7 227 aa16.89■□□□□ 0.29
SCARB1-201ENST00000261693 OR5AC1P0C628 307 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 PHLDA2Q53GA4 152 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 NSUN5P2Q63ZY6 315 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 SLC25A43Q8WUT9 341 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-201ENST00000261693 NABP1Q96AH0 204 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 FBXO17Q96EF6 278 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 REEP6Q96HR9 211 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 Q96M66 194 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 GNRHR2Q96P88 292 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 SPSB2Q99619 263 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 CACNA1EQ15878 2313 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 C1QL1O75973 258 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 SNRNP70P08621 437 aaKnown RBP16.88■□□□□ 0.29
SCARB1-201ENST00000261693 DAOP14920 347 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 ACKR3P25106 362 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 OPN5Q6U736 354 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 ISOC2Q96AB3 205 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 NAA11Q9BSU3 229 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-201ENST00000261693 IFT22Q9H7X7 185 aa16.88■□□□□ 0.29
SCARB1-201ENST00000261693 CHCHD2Q9Y6H1 151 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-201ENST00000261693 A0A1B0GV50 99 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 GAPDHP04406 335 aaKnown RBP16.87■□□□□ 0.29
SCARB1-201ENST00000261693 SRFP11831 508 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 B2MP61769 119 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 RSU1Q15404 277 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 LYZL2Q7Z4W2 148 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 SGK3Q96BR1 496 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 WFDC1Q9HC57 220 aa16.87■□□□□ 0.29
SCARB1-201ENST00000261693 BCAT2O15382 392 aaPredicted RBP16.87■□□□□ 0.29
SCARB1-201ENST00000261693 JSRP1Q96MG2 331 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms