RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 A0A0U1RQV5 110 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 C5orf51A6NDU8 294 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 SYNGR3O43761 229 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 FGF2P09038 288 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 PRF1P14222 555 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 SNU13P55769 128 aaKnown RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 RPS27AP62979 156 aaKnown RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 TAF9Q16594 264 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 CYB5R2Q6BCY4 276 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 PPP1R1CQ8WVI7 109 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 DYRK2Q92630 601 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 MRPS24Q96EL2 167 aaKnown RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 ADGRG7Q96K78 797 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 SF3B5Q9BWJ5 86 aaKnown RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 CALHM2Q9HA72 323 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 V9GYS6 101 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 LAMA5O15230 3695 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 MFNGO00587 321 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 CDX4O14627 284 aaPredicted RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 NEURL1O76050 574 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 OR3A2P47893 321 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 KCNJ3P48549 501 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 FOXG1P55316 489 aaPredicted RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 FGL1Q08830 312 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 TSPO2Q5TGU0 170 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 GSG1LQ6UXU4 331 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 FOXL2NBQ6ZUU3 175 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 SKA3Q8IX90 412 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 OR5H2Q8NGV7 314 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 CMSS1Q9BQ75 279 aaKnown RBP13.74□□□□□ -0.21
LRFN1-201ENST00000248668 TMPRSS13Q9BYE2 586 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 BOD1L1Q8NFC6 3051 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 DMXL1Q9Y485 3027 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 SCGNO76038 276 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 HIST1H3AP68431 136 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 RAB35Q15286 201 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 HIST2H3PS2Q5TEC6 136 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 HIST2H3AQ71DI3 136 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 SSC4DQ8WTU2 575 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 EHFQ9NZC4 300 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 ZFHX4Q86UP3 3567 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 FAM221AA4D161 298 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 EFSO43281 561 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 LY86O95711 162 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 IGLV3-1P01715 115 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 GSTP1P09211 210 aaKnown RBP13.73□□□□□ -0.21
LRFN1-201ENST00000248668 C4BPBP20851 252 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 TMEM164Q5U3C3 297 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 OR2M7Q8NG81 312 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 SLC2A8Q9NY64 477 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 FBLN5Q9UBX5 448 aa13.73□□□□□ -0.21
LRFN1-201ENST00000248668 IGKV1D-8A0A087WSZ0 117 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 CRYGSP22914 178 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF133P52736 654 aaPredicted RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 AKR1C2P52895 323 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 GK2Q14410 553 aaPredicted RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 OR1C1Q15619 314 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 FAM74A1Q5RGS3 127 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 ELP2Q6IA86 826 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 TERB2Q8NHR7 220 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 PP6455Q8WZ26 134 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 HAS2Q92819 552 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 INTS12Q96CB8 462 aaKnown RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 PHB2Q99623 299 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 PECRQ9BY49 303 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 GPR35Q9HC97 309 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 COMMD9Q9P000 198 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF107Q9UII5 783 aaPredicted RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 IGKV1-27A0A075B6S5 117 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 RFPL4AA6NLU0 287 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 RFPL4AL1F8VTS6 287 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 RLN2P04090 185 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 CNR1P21554 472 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 H3F3CQ6NXT2 135 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 SULF2Q8IWU5 870 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 FNDC9Q8TBE3 224 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 PLEKHJ1Q9NW61 149 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 MCTS1Q9ULC4 181 aaKnown RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 PCDHGA1Q9Y5H4 931 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 SPTAN1Q13813 2472 aaKnown RBP13.72□□□□□ -0.21
LRFN1-201ENST00000248668 HMSDA8MTL9 139 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 GFRA1P56159 465 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF92Q03936 586 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 MPPED2Q15777 294 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 OR1S1Q8NH92 325 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 WNT5BQ9H1J7 359 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 DCAF16Q9NXF7 216 aa13.72□□□□□ -0.21
LRFN1-201ENST00000248668 MT-CO3P00414 261 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 KNG1P01042 644 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 SERPINA5P05154 406 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 OPRM1P35372 400 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 RRADP55042 308 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 PLGLB1Q02325 96 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 DCAF10Q5QP82 559 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 TUSC5Q8IXB3 177 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms