RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 NUBP2Q9Y5Y2 271 aa12.17□□□□□ -0.46
SDF2-201ENST00000247020 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 A0A1W2PP11 408 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 WIPF3A6NGB9 483 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 MFNGO00587 321 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 TPD52L2O43399 206 aaKnown RBP12.16□□□□□ -0.46
SDF2-201ENST00000247020 SPRY1O43609 319 aaPredicted RBP12.16□□□□□ -0.46
SDF2-201ENST00000247020 HTR3BO95264 441 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 CRYAAP02489 173 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 RCVRNP35243 200 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 CBX5P45973 191 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 RAG2P55895 527 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 TMEM50BP56557 158 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 TAS2R19P59542 299 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 BTG1P62324 171 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 FAM27E3Q08E93 113 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 PSG7Q13046 419 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 SPATA46Q5T0L3 261 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 SEZ6L2Q6UXD5 910 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 CELF2-AS1Q8N7Q2 184 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 RNF170Q96K19 258 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 MICU1Q9BPX6 476 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 SELENOIQ9C0D9 397 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 NPAP1Q9NZP6 1156 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 NLKQ9UBE8 527 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 SH3BGRL2Q9UJC5 107 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 HSF4Q9ULV5 492 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
SDF2-201ENST00000247020 TMEM235A6NFC5 223 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 TMEM210A6NLX4 147 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 ZNF732B4DXR9 585 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 H3BUI4 141 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 AKAIN1P0CW23 69 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 MPZP25189 248 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 GCH1P30793 250 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 CALCRP30988 508 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 CCKARP32238 428 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 HAAOP46952 286 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 GPM6AP51674 278 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
SDF2-201ENST00000247020 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 FAM76BQ5HYJ3 339 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 MTFR2Q6P444 385 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 CALHM1Q8IU99 346 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 CADM3Q8N126 398 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 SPERTQ8NA61 448 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 OR8G5Q8NG78 346 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 OR10K1Q8NGX5 313 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 CCDC120Q96HB5 630 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 CACNG6Q9BXT2 260 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 FGF23Q9GZV9 251 aaPredicted RBP12.15□□□□□ -0.46
SDF2-201ENST00000247020 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 PURGQ9UJV8 347 aaKnown RBP12.15□□□□□ -0.46
SDF2-201ENST00000247020 ANAPC10Q9UM13 185 aa12.15□□□□□ -0.46
SDF2-201ENST00000247020 TLN1Q9Y490 2541 aaKnown RBP12.15□□□□□ -0.46
SDF2-201ENST00000247020 IGKV1-12A0A0C4DH73 117 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 A0A1B0GWJ7 208 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 M0R1B8 84 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 SOCS1O15524 211 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 ANGPTL7O43827 346 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 IGKV1D-12P01611 117 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 TBPP20226 339 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 CA6P23280 308 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 BLVRBP30043 206 aaPredicted RBP12.14□□□□□ -0.47
SDF2-201ENST00000247020 GLRXP35754 106 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 PMELP40967 661 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 ASCL1P50553 236 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 ZNF83P51522 516 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 GNG2P59768 71 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 ERVS71-1P61550 626 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 IL24Q13007 206 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 FBXL19-AS1Q494R0 122 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
SDF2-201ENST00000247020 BHLHE23Q8NDY6 225 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 MMP28Q9H239 520 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 PLK3Q9H4B4 646 aa12.14□□□□□ -0.47
SDF2-201ENST00000247020 HEATR1Q9H583 2144 aaKnown RBP12.14□□□□□ -0.47
SDF2-201ENST00000247020 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 LRP5LA4QPB2 252 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 LILRA1O75019 489 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 CD74P04233 296 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 TCRBP04435 133 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 GNB3P16520 340 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 NKX6-1P78426 367 aaPredicted RBP12.13□□□□□ -0.47
SDF2-201ENST00000247020 SLC25A26Q70HW3 274 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 BTN2A1Q7KYR7 527 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 TRAPPC6BQ86SZ2 158 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 FJX1Q86VR8 437 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ST8SIA4Q92187 359 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 UPRTQ96BW1 309 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ARHGAP5-AS1Q96IT6 56 aa12.13□□□□□ -0.47
SDF2-201ENST00000247020 ADAT1Q9BUB4 502 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms