RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 IGKV1-27A0A075B6S5 117 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 A0A0D9SG52 128 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 CEACAM18A8MTB9 384 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 CFDP00746 253 aaPredicted RBP13.12□□□□□ -0.31
DDX49-201ENST00000247003 C3AR1Q16581 482 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 MRPL21Q7Z2W9 205 aaKnown RBP13.12□□□□□ -0.31
DDX49-201ENST00000247003 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 OSR2Q8N2R0 312 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 TMEM185AQ8NFB2 350 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 PXT1Q8NFP0 134 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 COQ8AQ8NI60 647 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 GSX2Q9BZM3 304 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 FN3KRPQ9HA64 309 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 IL36GQ9NZH8 169 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 C14orf166Q9Y224 244 aaKnown RBP13.12□□□□□ -0.31
DDX49-201ENST00000247003 CACNA1HO95180 2353 aa13.12□□□□□ -0.31
DDX49-201ENST00000247003 TRGV5A0A0B4J1U4 118 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 C5orf49A4QMS7 147 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 LEUTXA8MZ59 168 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 HLA-HP01893 362 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 AP2S1P53680 142 aaPredicted RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 SURF2Q15527 256 aaPredicted RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 TAF9Q16594 264 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 THOC7Q6I9Y2 204 aaKnown RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 C11orf87Q6NUJ2 197 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 ASCL4Q6XD76 172 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 PEG10Q86TG7 708 aaKnown RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 LHFPL1Q86WI0 220 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 NAXEQ8NCW5 288 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 OR13G1Q8NGZ3 307 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 NANOS1Q8WY41 292 aaKnown RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 APOBEC3DQ96AK3 386 aaPredicted RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 DEFB127Q9H1M4 99 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 OPA3Q9H6K4 179 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 KIF25Q9UIL4 384 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 GPR179Q6PRD1 2367 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 CNTRLQ7Z7A1 2325 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 CUL9Q8IWT3 2517 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 TRAV14DV4A0A0A6YYC5 116 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 RPS10-NUDT3A0A1W2PQS6 291 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 SLC25A4P12235 298 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 PGAM2P15259 253 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 PDZK1IP1Q13113 114 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 TMEM65Q6PI78 240 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 COLCA1Q6ZS62 124 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 OVCH2Q7RTZ1 564 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 DPPA2Q7Z7J5 298 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 PPP1R1CQ8WVI7 109 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 SEC22AQ96IW7 307 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 CMSS1Q9BQ75 279 aaKnown RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 PAPOLGQ9BWT3 736 aaKnown RBP13.11□□□□□ -0.31
DDX49-201ENST00000247003 C5orf66Q9H5L9 145 aa13.11□□□□□ -0.31
DDX49-201ENST00000247003 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 B3GALNT1O75752 331 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 SFT2D2O95562 160 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 DTYMKP23919 212 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 SOX8P57073 446 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 RAB1AP62820 205 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 ZNF345Q14585 488 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 TGIF1Q15583 401 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 RPUSD3Q6P087 351 aaKnown RBP13.1□□□□□ -0.31
DDX49-201ENST00000247003 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 COMMD7Q86VX2 200 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 SCARB1Q8WTV0 552 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 OSGIN2Q9Y236 505 aa13.1□□□□□ -0.31
DDX49-201ENST00000247003 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 C13orf42A0A1B0GVH6 325 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 FIGNL2A6NMB9 653 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 ZNF850A8MQ14 1090 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 CDRT15L2A8MXV6 281 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 RRP8O43159 456 aaKnown RBP13.09□□□□□ -0.31
DDX49-201ENST00000247003 OR2F2O95006 317 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 APLNRP35414 380 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 BAMBIQ13145 260 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 OR2F1Q13607 317 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 PLEKHN1Q494U1 663 aaPredicted RBP13.09□□□□□ -0.31
DDX49-201ENST00000247003 NHLRC3Q5JS37 347 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 NSUN5P2Q63ZY6 315 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 P4HA3Q7Z4N8 544 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 ZSCAN4Q8NAM6 433 aaPredicted RBP13.09□□□□□ -0.31
DDX49-201ENST00000247003 OR56B2PQ8NGI1 322 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 OR6K3Q8NGY3 331 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 OR51F2Q8NH61 342 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 C12orf49Q9H741 205 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
DDX49-201ENST00000247003 AK3Q9UIJ7 227 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms