RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 NELFAQ9H3P2 528 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 RANBP3Q9H6Z4 567 aaPredicted RBP7.51□□□□□ -1.21
VPS4B-201ENST00000238497 DLL4Q9NR61 685 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 CRIM1Q9NZV1 1036 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 FBN2P35556 2912 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 M0R233 179 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 SULT1B1O43704 296 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 ICMTO60725 284 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 CPN1P15169 458 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 AMY2BP19961 511 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 CLDN18P56856 261 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 TAS2R19P59542 299 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 KISS1Q15726 138 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 CD276Q5ZPR3 534 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 HDDC2Q7Z4H3 204 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 TCTE3Q8IZS6 198 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 CSNK2A3Q8NEV1 391 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 FGFBP3Q8TAT2 258 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 OIT3Q8WWZ8 545 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 DYRK2Q92630 601 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 WNT2BQ93097 391 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 SPTSSAQ969W0 71 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 TMPRSS13Q9BYE2 586 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 PLEKHJ1Q9NW61 149 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF629Q9UEG4 869 aaPredicted RBP7.51□□□□□ -1.21
VPS4B-201ENST00000238497 ITPR3Q14573 2671 aa7.51□□□□□ -1.21
VPS4B-201ENST00000238497 SPDEFO95238 335 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 LPLP06858 475 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF708P17019 499 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 FXYD4P59646 89 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 ZP1P60852 638 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 RAB14P61106 215 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 UNC119Q13432 240 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 BCL2A1Q16548 175 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 ELFN2Q5R3F8 820 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 SPATA46Q5T0L3 261 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 DCAF12L2Q5VW00 463 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MOB3CQ70IA8 216 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 C6orf201Q7Z4U5 140 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 TMEM17Q86X19 198 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 FADS6Q8N9I5 356 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 OR4K15Q8NH41 348 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 OR2V1Q8NHB1 315 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MARCH1Q8TCQ1 289 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 THRSPQ92748 146 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 RNASE6Q93091 150 aaKnown RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 TOMM40LQ969M1 308 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 HDHD3Q9BSH5 251 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MRI1Q9BV20 369 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 ZC4H2Q9NQZ6 224 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 TAS2R8Q9NYW2 309 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 RAB22AQ9UL26 194 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MCTS1Q9ULC4 181 aaKnown RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MEX3AA1L020 520 aaKnown RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 GJE1A6NN92 205 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 NDUFB6O95139 128 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 FARS2O95363 451 aaKnown RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 CEACAM8P31997 349 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 RAC3P60763 192 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 IL13RA1P78552 427 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 RSU1Q15404 277 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 PCK2Q16822 640 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 TSPO2Q5TGU0 170 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 LAMTOR1Q6IAA8 161 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 VWA1Q6PCB0 445 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 C15orf40Q8WUR7 153 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 FOXB1Q99853 325 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 CHMP1AQ9HD42 196 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 KIAA1549Q9HCM3 1950 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 A0A1B0GTI1 187 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MBD3L4A6NDZ8 208 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MBD3L3A6NE82 208 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 NAP1L6A6NFF2 107 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MBD3L5A6NJ08 208 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 SLC33A1O00400 549 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 GSTZ1O43708 216 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 IGHMP01871 453 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 SERPINA5P05154 406 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 CD1AP06126 327 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 TRAPPC2P0DI81 140 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 TRAPPC2BP0DI82 140 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 S100A1P23297 94 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 P2RY4P51582 365 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MRPS10P82664 201 aaKnown RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 MBD3L2Q8NHZ7 208 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 C7orf50Q9BRJ6 194 aaKnown RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 OPN3Q9H1Y3 402 aaPredicted RBP7.5□□□□□ -1.21
VPS4B-201ENST00000238497 KCNK7Q9Y2U2 307 aa7.5□□□□□ -1.21
VPS4B-201ENST00000238497 C5orf49A4QMS7 147 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 DISC1C4P0D8 188 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 RAB27BO00194 218 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 ERCC1P07992 297 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 ADH6P28332 368 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 FAM27E3Q08E93 113 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 UBE2V2Q15819 145 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 LGALSLQ3ZCW2 172 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PDSS1Q5T2R2 415 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 HACD4Q5VWC8 232 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 OR2A2Q6IF42 318 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 GLDNQ6ZMI3 551 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms