RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ELL3Q9HB65 397 aaPredicted RBP13.58□□□□□ -0.23
DDX55-201ENST00000238146 XRCC2O43543 280 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 DIRAS3O95661 229 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 FCGR2AP12318 317 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 ZNF43P17038 809 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 ARL4DP49703 201 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 PIGPP57054 158 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 SMAD4Q13485 552 aaKnown RBP13.58□□□□□ -0.24
DDX55-201ENST00000238146 ARL6IP1Q15041 203 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 DEFB133Q30KQ1 61 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 C17orf82Q86X59 251 aaPredicted RBP13.58□□□□□ -0.24
DDX55-201ENST00000238146 KCNJ16Q9NPI9 418 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 PPP4R1LQ9P1A2 415 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 FER1L5A0AVI2 2057 aa13.58□□□□□ -0.24
DDX55-201ENST00000238146 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
DDX55-201ENST00000238146 ETV2O00321 342 aaPredicted RBP13.57□□□□□ -0.24
DDX55-201ENST00000238146 IGLV3-19P01714 112 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 PRH1P02810 166 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 QDPRP09417 244 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 FOLR1P15328 257 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
DDX55-201ENST00000238146 GABRR1P24046 479 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 PPA1Q15181 289 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 NCMAPQ5T1S8 102 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 APCDD1LQ8NCL9 501 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 POC1BQ8TC44 478 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 HPSE2Q8WWQ2 592 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 PGAM5Q96HS1 289 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 TMPRSS5Q9H3S3 457 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 PLEKHJ1Q9NW61 149 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 CD207Q9UJ71 328 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 ANXA10Q9UJ72 324 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 GPR137BO60478 399 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 IGLV3-1P01715 115 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 OR13C7P0DN81 318 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 FAHP16930 419 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 GRB2P62993 217 aaKnown RBP13.57□□□□□ -0.24
DDX55-201ENST00000238146 KCNMB1Q16558 191 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 S100A13Q99584 98 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 ZDHHC8Q9ULC8 765 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 RAMP1O60894 148 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 ZNF205O95201 554 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 OR5AC1P0C628 307 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 MAS1LP35410 378 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 EIF3IQ13347 325 aaKnown RBP13.57□□□□□ -0.24
DDX55-201ENST00000238146 TMEM187Q14656 261 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 RTL6Q6ICC9 239 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 PLPP5Q8NEB5 264 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 OR6X1Q8NH79 312 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 RLN3Q8WXF3 142 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 SDHAF3Q9NRP4 125 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 KCNIP3Q9Y2W7 256 aa13.57□□□□□ -0.24
DDX55-201ENST00000238146 ASXL3Q9C0F0 2248 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 TMEM225BP0DP42 221 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
DDX55-201ENST00000238146 RAB5CP51148 216 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 RPS23P62266 143 aaKnown RBP13.56□□□□□ -0.24
DDX55-201ENST00000238146 GPR157Q5UAW9 335 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 PLXDC2Q6UX71 529 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 SLC38A9Q8NBW4 561 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 TOMM40LQ969M1 308 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 PIGTQ969N2 578 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 MRGPRX4Q96LA9 322 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 YPEL4Q96NS1 127 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 STRAPQ9Y3F4 350 aaKnown RBP13.56□□□□□ -0.24
DDX55-201ENST00000238146 NCOA6Q14686 2063 aaPredicted RBP13.56□□□□□ -0.24
DDX55-201ENST00000238146 A0A1B0GV50 99 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 A0A1B0GX78 115 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 FBP1P09467 338 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 CTSSP25774 331 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 ZNF41P51814 821 aaPredicted RBP13.56□□□□□ -0.24
DDX55-201ENST00000238146 RRADP55042 308 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 RAB1AP62820 205 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 NHLH2Q02577 135 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 DLX2Q07687 328 aaPredicted RBP13.56□□□□□ -0.24
DDX55-201ENST00000238146 HIST3H3Q16695 136 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 PLPPR5Q32ZL2 321 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 AKR7LQ8NHP1 331 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 HAS2Q92819 552 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 PBDC1Q9BVG4 233 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 NAA60Q9H7X0 242 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 HDGFL3Q9Y3E1 203 aa13.56□□□□□ -0.24
DDX55-201ENST00000238146 MED12Q93074 2177 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 DHRS3O75911 302 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 KLK2P20151 261 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 OR1D5P58170 312 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 CLINT1Q14677 625 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 SLC25A53Q5H9E4 307 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 TSPO2Q5TGU0 170 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 ADPRHL1Q8NDY3 354 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 RTN4IP1Q8WWV3 396 aaPredicted RBP13.55□□□□□ -0.24
DDX55-201ENST00000238146 GALNT14Q96FL9 552 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 Q96M66 194 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 SPSB2Q99619 263 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms