RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CES1P1Q9UKY3 287 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 DHDHQ9UQ10 334 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 TBL1XO60907 577 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 CTSVO60911 334 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 DDNO94850 711 aaPredicted RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 SCGB1D2O95969 90 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 ALOX5APP20292 161 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 RAB11AP62491 216 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 LRRC73Q5JTD7 316 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 GABRG3Q99928 467 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 SLC45A2Q9UMX9 530 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 ST3GAL6Q9Y274 331 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 FAM230AA0A1W2PPH8 454 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 FAM221AA4D161 298 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 MEGF11A6BM72 1044 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 C4orf47A7E2U8 309 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 CTXN2P0C2S0 81 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 RPS20P60866 119 aaKnown RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 ZNF92Q03936 586 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 AGBL4Q5VU57 503 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 Q6ZVH6 145 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 TMEM256Q8N2U0 113 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 D2HGDHQ8N465 521 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 OR13G1Q8NGZ3 307 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 WBP2Q969T9 261 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 RASL10BQ96S79 203 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 AICDAQ9GZX7 198 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 PELI2Q9HAT8 420 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 GPR84Q9NQS5 396 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 RNF24Q9Y225 148 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 SLC22A13Q9Y226 551 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 RBM7Q9Y580 266 aaKnown RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 A0A1B0GWA3 101 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 NUPR1O60356 82 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 ATP6V0CP27449 155 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 PTGER4P35408 488 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 REEP5Q00765 189 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 PLAURQ03405 335 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 MESP2Q0VG99 397 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 C9orf50Q5SZB4 431 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 LDLRAD2Q5SZI1 272 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 C1QL3Q5VWW1 255 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 CENPVQ7Z7K6 275 aaPredicted RBP11.46□□□□□ -0.57
MSH2-201ENST00000233146 RTN4RL2Q86UN3 420 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 OR2V1Q8NHB1 315 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 IL22RA2Q969J5 263 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 PLD4Q96BZ4 506 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 IL19Q9UHD0 177 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 LAMTOR2Q9Y2Q5 125 aa11.46□□□□□ -0.57
MSH2-201ENST00000233146 TRAV30A0A087WSZ9 112 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 J3QW42 95 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 CD33P20138 364 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 TUBG1P23258 451 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 RBMXP38159 391 aaKnown RBP11.46□□□□□ -0.58
MSH2-201ENST00000233146 UBE2NP61088 152 aaKnown RBP11.46□□□□□ -0.58
MSH2-201ENST00000233146 UNC119Q13432 240 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 ZNF619Q8N2I2 560 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 C10orf53Q8N6V4 93 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.58
MSH2-201ENST00000233146 SMIM12Q96EX1 92 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 C6orf106Q9H6K1 298 aaPredicted RBP11.46□□□□□ -0.58
MSH2-201ENST00000233146 CALHM2Q9HA72 323 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 OR6C3Q9NZP0 311 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 RBPJLQ9UBG7 517 aa11.46□□□□□ -0.58
MSH2-201ENST00000233146 SMPD2O60906 423 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 EPHA8P29322 1005 aaPredicted RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 CAPZBP47756 277 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 CXCL9Q07325 125 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 CEBPEQ15744 281 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 Q6ZWC4 215 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 C16orf82Q7Z2V1 217 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 PPP1R14AQ96A00 147 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 ZDHHC6Q9H6R6 413 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 WDR76Q9H967 626 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 MAP1LC3B2A6NCE7 125 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 TRAPPC6AO75865 159 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 CSNK1A1P48729 337 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 PTCRAQ6ISU1 281 aaPredicted RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 FBXO42Q6P3S6 717 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 EMG1Q92979 244 aaKnown RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 ZNF681Q96N22 645 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 MAP1LC3BQ9GZQ8 125 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 PLK3Q9H4B4 646 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 TMEM9BQ9NQ34 198 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 NSG1A0A0A6YYJ2 146 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 FGF17O60258 216 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 ACAA2P42765 397 aaKnown RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 CDC34P49427 236 aaPredicted RBP11.45□□□□□ -0.58
MSH2-201ENST00000233146 SLC48A1Q6P1K1 146 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 UNQ5815/PRO19632Q6UWF5 114 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 DPY19L4Q7Z388 723 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 HSD11B1LQ7Z5J1 315 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
MSH2-201ENST00000233146 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms