RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 TAAR5O14804 337 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 GZMBP10144 247 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 HOXA6P31267 233 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 PRTGQ2VWP7 1150 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 WDFY1Q8IWB7 410 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC22A24Q8N4F4 322 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 TOMM40LQ969M1 308 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC25A31Q9H0C2 315 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 MRPS28Q9Y2Q9 187 aaKnown RBP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 TNFSF12O43508 249 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 DFFBO76075 338 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 NSA2O95478 260 aaKnown RBP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 DIRAS3O95661 229 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 HKR1P10072 659 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 HLA-GP17693 338 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 PLAC9Q5JTB6 97 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 C1orf140Q5VVS0 124 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 ABHD5Q8WTS1 349 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 FGF14Q92915 247 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 TXNIPQ9H3M7 391 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 FBRSQ9HAH7 460 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 CDRT15L2A8MXV6 281 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 LDLRAD4O15165 306 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 RAD51DO75771 328 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 SFT2D2O95562 160 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 MPZP25189 248 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 NTSR1P30989 418 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 RBMXP38159 391 aaKnown RBP12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 LBX1P52954 281 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 HNRNPKP61978 463 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC35A1P78382 337 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 PLCXD2Q0VAA5 305 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 PARM1Q6UWI2 310 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 GNRHR2Q96P88 292 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 GAB2Q9UQC2 676 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 CDAP32320 146 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 TAS2R31P59538 309 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF880Q6PDB4 577 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 OR51T1Q8NGJ9 327 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 OR5D14Q8NGL3 314 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 POC1BQ8TC44 478 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 ERGIC1Q969X5 290 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 TMEM59Q9BXS4 323 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 CCDC163A0A0D9SF12 145 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 HSD11B1P28845 292 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC6A9P48067 706 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 SNU13P55769 128 aaKnown RBP12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 VAMP2P63027 116 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 SUPT4H1P63272 117 aaKnown RBP12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 PLXDC2Q6UX71 529 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 PEG10Q86TG7 708 aaKnown RBP12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 REEP6Q96HR9 211 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 CCDC74BQ96LY2 380 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 GPR132Q9UNW8 380 aa12.49□□□□□ -0.41
PCDHB3-201ENST00000231130 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 A6NCN8 305 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 PRSS12P56730 875 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 FUT7Q11130 342 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 OR5I1Q13606 314 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 SGCBQ16585 318 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 ARSJQ5FYB0 599 aaPredicted RBP12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 ZFP62Q8NB50 900 aaPredicted RBP12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 NECAP1Q8NC96 275 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 CLDN16Q9Y5I7 305 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 TTRP02766 147 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 HNRNPA2B1P22626 353 aaKnown RBP12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 ROM1Q03395 351 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 JOSD1Q15040 202 aaPredicted RBP12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 C5orf24Q7Z6I8 188 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 ADAMTS18Q8TE60 1221 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 HAS2Q92819 552 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 SLAMF6Q96DU3 332 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 PBOV1Q9GZY1 135 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 LIPGQ9Y5X9 500 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 RFNGQ9Y644 331 aa12.48□□□□□ -0.41
PCDHB3-201ENST00000231130 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 IGHV3-20A0A0C4DH32 117 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF724A8MTY0 619 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 MKRN2OSH3BPM6 223 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 HSPA12AO43301 675 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 PGCP20142 388 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 CD81P60033 236 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 TOMM20Q15388 145 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 CHRFAM7AQ494W8 412 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms