RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 FAM57BQ71RH2 274 aa12.54□□□□□ -0.4
SHPK-201ENST00000225519 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 CTSEP14091 401 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 BIDP55957 195 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 HHEXQ03014 270 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 MEX3BQ6ZN04 569 aaKnown RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 CPEB2Q7Z5Q1 589 aaKnown RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 PACRGQ96M98 296 aaPredicted RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 GINS3Q9BRX5 216 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 CARD17Q5XLA6 110 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 TVP23CQ96ET8 276 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 ELOA3CA0A087WX78 387 aaPredicted RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 B4DGG1 531 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 H3BML4 177 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 TCAPO15273 167 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 HSPA12AO43301 675 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 PTBP3O95758 552 aaKnown RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 HPNP05981 417 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 NAXEQ8NCW5 288 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 TSLPQ969D9 159 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 ZNF775Q96BV0 537 aaPredicted RBP12.53□□□□□ -0.4
SHPK-201ENST00000225519 POM121Q96HA1 1249 aa12.53□□□□□ -0.4
SHPK-201ENST00000225519 C2orf72A6NCS6 295 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.4
SHPK-201ENST00000225519 OR5AC1P0C628 307 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 OR5H8P0DN80 308 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 SLC37A1P57057 533 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 CCL20P78556 96 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 ELOBQ15370 118 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 GRINAQ7Z429 371 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 SUMF1Q8NBK3 374 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 ADAMTS18Q8TE60 1221 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 TUBD1Q9UJT1 453 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 WSB1Q9Y6I7 421 aa12.52□□□□□ -0.4
SHPK-201ENST00000225519 TLCD2A6NGC4 264 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 CYTIPO60759 359 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 JMJD7P0C870 316 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 OPRM1P35372 400 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 ZNF121P58317 390 aaPredicted RBP12.52□□□□□ -0.41
SHPK-201ENST00000225519 HSF1Q00613 529 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 C6orf201Q7Z4U5 140 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 OR5AS1Q8N127 324 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 HIST3H2BBQ8N257 126 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.41
SHPK-201ENST00000225519 PECRQ9BY49 303 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 FBLN5Q9UBX5 448 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 TMED3Q9Y3Q3 217 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 A6NCN8 305 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 CTSDP07339 412 aaPredicted RBP12.52□□□□□ -0.41
SHPK-201ENST00000225519 TRGC1P0CF51 173 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 SUCLG1P53597 346 aaKnown RBP12.52□□□□□ -0.41
SHPK-201ENST00000225519 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.41
SHPK-201ENST00000225519 SLC25A24Q6NUK1 477 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 RTL10Q7L3V2 364 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 STT3BQ8TCJ2 826 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 HAS2Q92819 552 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 BMFQ96LC9 184 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 HDHD3Q9BSH5 251 aaPredicted RBP12.52□□□□□ -0.41
SHPK-201ENST00000225519 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 VDAC3Q9Y277 283 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 HS3ST3B1Q9Y662 390 aa12.52□□□□□ -0.41
SHPK-201ENST00000225519 CCDC163A0A0D9SF12 145 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 MASP2O00187 686 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 HOXB2P14652 356 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 CLRN1P58418 232 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 RND3P61587 244 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 C1orf87Q8N0U7 546 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 ASB10Q8WXI3 467 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 SNX22Q96L94 193 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 SLC7A11Q9UPY5 501 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 RFNGQ9Y644 331 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 TNFP01375 233 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 DUSP1P28562 367 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 ECI1P42126 302 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 OR1D4P47884 311 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
SHPK-201ENST00000225519 VAMP2P63027 116 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
SHPK-201ENST00000225519 PPA1Q15181 289 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 H1FNTQ75WM6 255 aaPredicted RBP12.51□□□□□ -0.41
SHPK-201ENST00000225519 DPPA2Q7Z7J5 298 aa12.51□□□□□ -0.41
SHPK-201ENST00000225519 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms