RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
PTPRA-201ENST00000216877 ANKRD9Q96BM1 317 aaPredicted RBP12.97□□□□□ -0.33
PTPRA-201ENST00000216877 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 SYT3Q9BQG1 590 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 PTPRSQ13332 1948 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 RPL36A-HNRNPH2H7BZ11 118 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 MPZL1O95297 269 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 CEACAM6P40199 344 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 ENDOGQ14249 297 aaKnown RBP12.97□□□□□ -0.33
PTPRA-201ENST00000216877 DNLZQ5SXM8 178 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 GLIPR1L1Q6UWM5 242 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 CDRT4Q8N9R6 151 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 VN1R17PQ8TDU5 208 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 SRPK3Q9UPE1 567 aa12.97□□□□□ -0.33
PTPRA-201ENST00000216877 POLR3KQ9Y2Y1 108 aaPredicted RBP12.97□□□□□ -0.33
PTPRA-201ENST00000216877 NSG1A0A0A6YYJ2 146 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 H7BYZ3 331 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 CSRP1P21291 193 aaKnown RBP12.96□□□□□ -0.33
PTPRA-201ENST00000216877 OGFOD3Q6PK18 319 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 DPPA3Q6W0C5 159 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 OR13G1Q8NGZ3 307 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 THRSPQ92748 146 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 HLA-CQ95604 372 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 ARHGAP5-AS1Q96IT6 56 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 CIB3Q96Q77 187 aaPredicted RBP12.96□□□□□ -0.33
PTPRA-201ENST00000216877 PLA2G3Q9NZ20 509 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 OR5AC1P0C628 307 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 VSIG8P0DPA2 414 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF823P16415 610 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 VIPR2P41587 438 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 TESK1Q15569 626 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 OR5L1Q8NGL2 311 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 YPEL4Q96NS1 127 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 RTBDNQ9BSG5 229 aaPredicted RBP12.96□□□□□ -0.33
PTPRA-201ENST00000216877 LMF2Q9BU23 707 aaKnown RBP12.96□□□□□ -0.33
PTPRA-201ENST00000216877 SCRT1Q9BWW7 348 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.33
PTPRA-201ENST00000216877 CES1P1Q9UKY3 287 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 INSL6Q9Y581 213 aa12.96□□□□□ -0.33
PTPRA-201ENST00000216877 FPR2P25090 351 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 BRS3P32247 399 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 SEC13P55735 322 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 ZNF92Q03936 586 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 FAM53BQ14153 422 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 Q7L0L9 218 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 PARS2Q7L3T8 475 aaKnown RBP12.96□□□□□ -0.34
PTPRA-201ENST00000216877 MYPOPQ86VE0 399 aaPredicted RBP12.96□□□□□ -0.34
PTPRA-201ENST00000216877 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.34
PTPRA-201ENST00000216877 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.34
PTPRA-201ENST00000216877 RAB38P57729 211 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 MMDQ15546 238 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 C2orf27AQ580R0 203 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 Q5PR19 223 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 FBXO42Q6P3S6 717 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 LYZL2Q7Z4W2 148 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 OR51T1Q8NGJ9 327 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 OR8B4Q96RC9 309 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 ARV1Q9H2C2 271 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 MRPS2Q9Y399 296 aaKnown RBP12.95□□□□□ -0.34
PTPRA-201ENST00000216877 RBM7Q9Y580 266 aaKnown RBP12.95□□□□□ -0.34
PTPRA-201ENST00000216877 USP34Q70CQ2 3546 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 A0A1W2PR80 420 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 ARPC3O15145 178 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 OR10J1P30954 320 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 PTGER4P35408 488 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 RPL18Q07020 188 aaKnown RBP12.95□□□□□ -0.34
PTPRA-201ENST00000216877 PRSS8Q16651 343 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 VAMP8Q9BV40 100 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 HS3ST2Q9Y278 367 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 WIPF3A6NGB9 483 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 ZNF93P35789 620 aaPredicted RBP12.95□□□□□ -0.34
PTPRA-201ENST00000216877 TDRG1Q3Y452 100 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 C1orf194Q5T5A4 169 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 OR2A1Q8NGT9 310 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
PTPRA-201ENST00000216877 PPIL1Q9Y3C6 166 aa12.95□□□□□ -0.34
PTPRA-201ENST00000216877 FANCMQ8IYD8 2048 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 A0A087WWC5 75 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 IGKV1-8A0A0C4DH67 115 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 OPN1MWP04001 364 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 OPN1MW2P0DN77 364 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 OPN1MW3P0DN78 364 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 GAGE1Q13065 139 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 UNC119Q13432 240 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.94□□□□□ -0.34
PTPRA-201ENST00000216877 NXT1Q9UKK6 140 aaKnown RBP12.94□□□□□ -0.34
PTPRA-201ENST00000216877 SZT2Q5T011 3432 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 SEC16AO15027 2179 aa12.94□□□□□ -0.34
PTPRA-201ENST00000216877 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms