RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GLB1P16278 677 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 SELEP16581 610 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 WFDC5Q8TCV5 224 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 BOD1Q96IK1 185 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 CXCL16Q9H2A7 254 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 DECR2Q9NUI1 292 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 SLC17A4Q9Y2C5 497 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 PRSS37A4D1T9 235 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 SPINT2O43291 252 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 ADAM20O43506 726 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 PRF1P14222 555 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 PLP1P60201 277 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 ATP6V1FQ16864 119 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 MPV17LQ2QL34 196 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 PABPC1L2AQ5JQF8 200 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 ACER2Q5QJU3 275 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 C8orf82Q6P1X6 216 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 OR11H4Q8NGC9 324 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 MS4A6EQ96DS6 147 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 OPN3Q9H1Y3 402 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 SLC25A22Q9H936 323 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 METTL1Q9UBP6 276 aaKnown RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 IDSB3KWA1 339 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 OR5G3P0C626 314 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 BMP5P22003 454 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 SCAND1P57086 179 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 THEM4Q5T1C6 240 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 GVQW1Q8N7I0 195 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 FGF22Q9HCT0 170 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 ENSAO43768 121 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 RPS23P62266 143 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 FAM3AP98173 230 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 BTNL3Q6UXE8 466 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 RTN4RL1Q86UN2 441 aaPredicted RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 RPS19BP1Q86WX3 136 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 DAPP1Q9UN19 280 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 ZNF732B4DXR9 585 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 PGA3P0DJD8 388 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 RPL34P49207 117 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 GNG4P50150 75 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 SPCS3P61009 180 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 HIST3H3Q16695 136 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 NKAIN1Q4KMZ8 207 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 TMEM240Q5SV17 173 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 PWWP2BQ6NUJ5 590 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 VHLLQ6RSH7 139 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 TDHQ8IZJ6 230 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 OR1L6Q8NGR2 347 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 ANGPTL4Q9BY76 406 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 MBNL1Q9NR56 388 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 SEMA7AO75326 666 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 RHBDL1O75783 438 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 RECKO95980 971 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 SMAD4Q13485 552 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 HLA-BQ31612 363 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 CLEC18BQ6UXF7 455 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 CAMKMTQ7Z624 323 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 ARHGAP5-AS1Q96IT6 56 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 S1PR5Q9H228 398 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 ALS2Q96Q42 1657 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 KCNAB3O43448 404 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 OR2J3O76001 311 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 C1QAP02745 245 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 FGF2P09038 288 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 WNT3P56703 355 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 RPS16P62249 146 aaKnown RBP9.35□□□□□ -0.91
VCL-201ENST00000211998 PAX5Q02548 391 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 HFEQ30201 348 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 FAAP24Q9BTP7 215 aa9.35□□□□□ -0.91
VCL-201ENST00000211998 ANKRD34CP0C6C1 535 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 STAG3L2P0CL84 134 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 GABRA6Q16445 453 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 WDR38Q5JTN6 314 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 DCAF12L2Q5VW00 463 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 LHFPL2Q6ZUX7 228 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 OR1P1Q8NH06 330 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 ZNF835Q9Y2P0 537 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 ZNF729A6NN14 1252 aaPredicted RBP9.34□□□□□ -0.91
VCL-201ENST00000211998 G3V3Y1 287 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 HIST1H1DP16402 221 aaKnown RBP9.34□□□□□ -0.91
VCL-201ENST00000211998 DYNLT3P51808 116 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 SLC38A11Q08AI6 406 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 GAMTQ14353 236 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 LAIR1Q6GTX8 287 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 OR10G3Q8NGC4 313 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 PRSS3P2Q8NHM4 247 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 RDH5Q92781 318 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 ZFP64Q9NPA5 681 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 DOK5Q9P104 306 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 ANKRD36CQ5JPF3 1778 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 ADAM11O75078 769 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 BSGP35613 385 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 CCR2P41597 374 aa9.34□□□□□ -0.91
VCL-201ENST00000211998 CCL11P51671 97 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms