RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	METTL9	Q9H1A3	318 aa		10.06	□□□□□ -0.8
CLN6-223	ENST00000637823	DIABLO	Q9NR28	239 aa		10.06	□□□□□ -0.8
CLN6-223	ENST00000637823	PCDHB16	Q9NRJ7	776 aa		10.06	□□□□□ -0.8
CLN6-223	ENST00000637823	ICE1	Q9Y2F5	2266 aa		10.06	□□□□□ -0.8
CLN6-223	ENST00000637823	SPTBN1	Q01082	2364 aa	Known RBP	10.06	□□□□□ -0.8
CLN6-223	ENST00000637823	IGLV3-9	A0A075B6K5	115 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823		A0A0A6YYH2	397 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823		A0A1B0GWJ7	208 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	METTL21EP	A6NDL7	271 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823		A6NJ64	397 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	XRCC3	O43542	346 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CTAG2	O75638	210 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	C1QL1	O75973	258 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CD3E	P07766	207 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CDK2	P24941	298 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	MNDA	P41218	407 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	MMP15	P51511	669 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	MZT1	Q08AG7	82 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	PLA2G7	Q13093	441 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	RSU1	Q15404	277 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	OR8G1	Q15617	311 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	ZNF79	Q15937	498 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	TMEM255A	Q5JRV8	349 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	PYHIN1	Q6K0P9	492 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	C1QL2	Q7Z5L3	287 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CDH24	Q86UP0	819 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	ZNF573	Q86YE8	665 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	OR5D18	Q8NGL1	313 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	OR8S1	Q8NH09	359 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	PLPPR2	Q96GM1	343 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	SDHC	Q99643	169 aa	Predicted RBP	10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CCDC32	Q9BV29	185 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	SRR	Q9GZT4	340 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	FGF23	Q9GZV9	251 aa	Predicted RBP	10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CST11	Q9H112	138 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	ATG5	Q9H1Y0	275 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	KCNK15	Q9H427	330 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	ZNF442	Q9H7R0	627 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	NKIRAS2	Q9NYR9	191 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	MYEF2	Q9P2K5	600 aa	Known RBP	10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	DUSP13	Q9UII6	198 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	FZR1	Q9UM11	496 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	ATP23	Q9Y6H3	246 aa		10.05	□□□□□ -0.8
CLN6-223	ENST00000637823	CHD3	Q12873	2000 aa	Known RBP	10.05	□□□□□ -0.8
CLN6-223	ENST00000637823		A0A0G2JMP0	313 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823		A0A0X1KG70	313 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	TMEM210	A6NLX4	147 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	SPRY1	O43609	319 aa	Predicted RBP	10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	ZNF780A	O75290	641 aa	Predicted RBP	10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	SCGN	O76038	276 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	CYB5A	P00167	134 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	UNC119	Q13432	240 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	SNTB1	Q13884	538 aa	Known RBP	10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	MSMP	Q1L6U9	139 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	ZNF181	Q2M3W8	571 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	SLC22A6	Q4U2R8	563 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	BEX5	Q5H9J7	111 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	FAM76B	Q5HYJ3	339 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	TMEM69	Q5SWH9	247 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	OR10K2	Q6IF99	312 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	RAB12	Q6IQ22	244 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	VHLL	Q6RSH7	139 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	TMEM200A	Q86VY9	491 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	LRP11	Q86VZ4	500 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	MKX	Q8IYA7	352 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	OR8H2	Q8N162	312 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	DTX3	Q8N9I9	347 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	OR4M2	Q8NGB6	313 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	OR51F2	Q8NH61	342 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	FAM46B	Q96A09	425 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	MRPL24	Q96A35	216 aa	Known RBP	10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	ADAT1	Q9BUB4	502 aa	Known RBP	10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	PKIB	Q9C010	78 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	CXXC4	Q9H2H0	198 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	OR51I2	Q9H344	312 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	ELL3	Q9HB65	397 aa	Predicted RBP	10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	CA10	Q9NS85	328 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	C14orf119	Q9NWQ9	140 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	IL36G	Q9NZH8	169 aa		10.04	□□□□□ -0.8
CLN6-223	ENST00000637823	ZFYVE26	Q68DK2	2539 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	LRP5L	A4QPB2	252 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	SHISA9	B4DS77	424 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823		H0YL77	283 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	CTDSPL	O15194	276 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	CDC14B	O60729	498 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	CRTAP	O75718	401 aa	Predicted RBP	10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	UPK1B	O75841	260 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	KDM4B	O94953	1096 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	HTR3B	O95264	441 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	MPIG6B	O95866	241 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	CSTB	P04080	98 aa	Known RBP	10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	CHRM2	P08172	466 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	HAAO	P46952	286 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	PTH2R	P49190	550 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823		Q6ZR03	302 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	SLC25A26	Q70HW3	274 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	BIVM	Q86UB2	503 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	CALHM1	Q8IU99	346 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823		Q8N402	240 aa		10.03	□□□□□ -0.8
CLN6-223	ENST00000637823	ZNF611	Q8N823	705 aa		10.03	□□□□□ -0.8

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