RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 HIST1H3AP68431 136 aa2.53□□□□□ -2
VIM-210ENST00000637053 PITX1P78337 314 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 H3F3AP84243 136 aa2.53□□□□□ -2
VIM-210ENST00000637053 SP4Q02446 784 aa2.53□□□□□ -2
VIM-210ENST00000637053 LTBQ06643 244 aa2.53□□□□□ -2
VIM-210ENST00000637053 ECH1Q13011 328 aa2.53□□□□□ -2
VIM-210ENST00000637053 BTN1A1Q13410 526 aa2.53□□□□□ -2
VIM-210ENST00000637053 OR5I1Q13606 314 aa2.53□□□□□ -2
VIM-210ENST00000637053 EIF2B1Q14232 305 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 LAGE3Q14657 143 aa2.53□□□□□ -2
VIM-210ENST00000637053 LTC4SQ16873 150 aa2.53□□□□□ -2
VIM-210ENST00000637053 IZUMO4Q1ZYL8 232 aa2.53□□□□□ -2
VIM-210ENST00000637053 TIGITQ495A1 244 aa2.53□□□□□ -2
VIM-210ENST00000637053 AKR1C8PQ5T2L2 129 aa2.53□□□□□ -2
VIM-210ENST00000637053 C1orf189Q5VU69 101 aa2.53□□□□□ -2
VIM-210ENST00000637053 TEX36Q5VZQ5 186 aa2.53□□□□□ -2
VIM-210ENST00000637053 STEAP4Q687X5 459 aa2.53□□□□□ -2
VIM-210ENST00000637053 TNFAIP8L2Q6P589 184 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 KCTD18Q6PI47 426 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 XKRXQ6PP77 449 aa2.53□□□□□ -2
VIM-210ENST00000637053 AGTRAPQ6RW13 159 aa2.53□□□□□ -2
VIM-210ENST00000637053 TBPL2Q6SJ96 375 aa2.53□□□□□ -2
VIM-210ENST00000637053 EPGNQ6UW88 154 aa2.53□□□□□ -2
VIM-210ENST00000637053 TEX261Q6UWH6 196 aa2.53□□□□□ -2
VIM-210ENST00000637053 Q6ZWC4 215 aa2.53□□□□□ -2
VIM-210ENST00000637053 HIST2H3AQ71DI3 136 aa2.53□□□□□ -2
VIM-210ENST00000637053 Q75L30 129 aa2.53□□□□□ -2
VIM-210ENST00000637053 C6orf120Q7Z4R8 191 aa2.53□□□□□ -2
VIM-210ENST00000637053 BCDIN3DQ7Z5W3 292 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 DEFB128Q7Z7B8 93 aa2.53□□□□□ -2
VIM-210ENST00000637053 LINC01551Q86U37 167 aa2.53□□□□□ -2
VIM-210ENST00000637053 PIGZQ86VD9 579 aa2.53□□□□□ -2
VIM-210ENST00000637053 IFNEQ86WN2 208 aa2.53□□□□□ -2
VIM-210ENST00000637053 TMEM139Q8IV31 216 aa2.53□□□□□ -2
VIM-210ENST00000637053 BAP18Q8IXM2 172 aa2.53□□□□□ -2
VIM-210ENST00000637053 PDZD9Q8IXQ8 264 aa2.53□□□□□ -2
VIM-210ENST00000637053 C8orf59Q8N0T1 100 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 UMODL1-AS1Q8N2C9 162 aa2.53□□□□□ -2
VIM-210ENST00000637053 C9orf62Q8N4C0 152 aa2.53□□□□□ -2
VIM-210ENST00000637053 CBR4Q8N4T8 237 aa2.53□□□□□ -2
VIM-210ENST00000637053 C12orf45Q8N5I9 185 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 SPICQ8N5J4 248 aa2.53□□□□□ -2
VIM-210ENST00000637053 C15orf54Q8N8G6 183 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZNF485Q8NCK3 441 aa2.53□□□□□ -2
VIM-210ENST00000637053 KLHDC9Q8NEP7 349 aa2.53□□□□□ -2
VIM-210ENST00000637053 SLC30A7Q8NEW0 376 aa2.53□□□□□ -2
VIM-210ENST00000637053 BEST4Q8NFU0 473 aa2.53□□□□□ -2
VIM-210ENST00000637053 KBTBD8Q8NFY9 601 aa2.53□□□□□ -2
VIM-210ENST00000637053 OR7A2PQ8NGA2 310 aa2.53□□□□□ -2
VIM-210ENST00000637053 OR4E2Q8NGC2 313 aa2.53□□□□□ -2
VIM-210ENST00000637053 OR4K17Q8NGC6 315 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZNRF2Q8NHG8 242 aa2.53□□□□□ -2
VIM-210ENST00000637053 MCFD2Q8NI22 146 aa2.53□□□□□ -2
VIM-210ENST00000637053 C11orf45Q8TAV5 145 aa2.53□□□□□ -2
VIM-210ENST00000637053 PIFOQ8TCI5 191 aa2.53□□□□□ -2
VIM-210ENST00000637053 GPR119Q8TDV5 335 aa2.53□□□□□ -2
VIM-210ENST00000637053 CANT1Q8WVQ1 401 aa2.53□□□□□ -2
VIM-210ENST00000637053 TCTEX1D2Q8WW35 142 aa2.53□□□□□ -2
VIM-210ENST00000637053 ASB13Q8WXK3 278 aa2.53□□□□□ -2
VIM-210ENST00000637053 DLX4Q92988 240 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 PTX4Q96A99 478 aa2.53□□□□□ -2
VIM-210ENST00000637053 CLDN23Q96B33 292 aa2.53□□□□□ -2
VIM-210ENST00000637053 FGGYQ96C11 551 aa2.53□□□□□ -2
VIM-210ENST00000637053 PPCDCQ96CD2 204 aa2.53□□□□□ -2
VIM-210ENST00000637053 DDIT4LQ96D03 193 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZMYND19Q96E35 227 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 PIK3IP1Q96FE7 263 aa2.53□□□□□ -2
VIM-210ENST00000637053 REEP6Q96HR9 211 aa2.53□□□□□ -2
VIM-210ENST00000637053 DIRAS2Q96HU8 199 aa2.53□□□□□ -2
VIM-210ENST00000637053 GPER1Q99527 375 aa2.53□□□□□ -2
VIM-210ENST00000637053 URM1Q9BTM9 101 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 HES7Q9BYE0 225 aa2.53□□□□□ -2
VIM-210ENST00000637053 SLC25A39Q9BZJ4 359 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 RNF167Q9H6Y7 350 aa2.53□□□□□ -2
VIM-210ENST00000637053 VSIRQ9H7M9 311 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZNF442Q9H7R0 627 aa2.53□□□□□ -2
VIM-210ENST00000637053 SLCO1B3Q9NPD5 702 aa2.53□□□□□ -2
VIM-210ENST00000637053 NRN1Q9NPD7 142 aa2.53□□□□□ -2
VIM-210ENST00000637053 SDR39U1Q9NRG7 319 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 MED29Q9NX70 200 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZNF230Q9UIE0 474 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 PYCARDQ9ULZ3 195 aa2.53□□□□□ -2
VIM-210ENST00000637053 SLC7A7Q9UM01 511 aa2.53□□□□□ -2
VIM-210ENST00000637053 STUB1Q9UNE7 303 aa2.53□□□□□ -2
VIM-210ENST00000637053 CARHSP1Q9Y2V2 147 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 WIPI2Q9Y4P8 454 aa2.53□□□□□ -2
VIM-210ENST00000637053 RAI2Q9Y5P3 530 aa2.53□□□□□ -2
VIM-210ENST00000637053 HSPE1-MOB4S4R3N1 261 aa2.53□□□□□ -2
VIM-210ENST00000637053 U3KQ87 197 aa2.53□□□□□ -2
VIM-210ENST00000637053 EVPLQ92817 2033 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PDS5BQ9NTI5 1447 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 YEATS2Q9ULM3 1422 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 A0A1W2PP64 1363 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CARMIL3Q8ND23 1372 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 IGSF9BQ9UPX0 1349 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 A0A0G2JK05 382 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 A0A0X1KG70 313 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TRAPPC13A5PLN9 417 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 C15orf61A6NNL5 157 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 USP27XA6NNY8 438 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms