RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RPS2P15880 293 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 CD80P33681 288 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 WNT4P56705 351 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 SLC35A2P78381 396 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 CNN3Q15417 329 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 UBE2V2Q15819 145 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 BOLLQ8N9W6 283 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 DNAAF1Q8NEP3 725 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 OR10AC1Q8NH08 325 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 ZNF671Q8TAW3 534 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 AQP3Q92482 292 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 TMEM186Q96B77 213 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 FGGYQ96C11 551 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 ADAT3Q96EY9 351 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 NEIL1Q96FI4 390 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 CDCA4Q9BXL8 241 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 Q9H521 79 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 METTL17Q9H7H0 456 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 ERVK-18Q9QC07 812 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 PCDHGB5Q9Y5G0 923 aa12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDC42BPB-209ENST00000634889 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 MTORP42345 2549 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 PPIAL4CA0A0B4J2A2 164 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 A8MXK9 166 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 J3QT63 122 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 PLPP2O43688 288 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 WNT2P09544 360 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 EGR1P18146 543 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 GATA3P23771 443 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 CRHBPP24387 322 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 HAAOP46952 286 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 FUT6P51993 359 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 MICBQ29980 383 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 DMRTC1Q5HYR2 192 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 DMKNQ6E0U4 476 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 HAGHLQ6PII5 290 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 FAM90A1Q86YD7 464 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 PARP16Q8N5Y8 322 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 NANOGP1Q8N7R0 232 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 C19orf18Q8NEA5 215 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR8B3Q8NGG8 313 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 GPR148Q8TDV2 347 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 SPSB1Q96BD6 273 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR8B2Q96RD0 313 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 MND1Q9BWT6 205 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 RASSF4Q9H2L5 321 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 DUSP21Q9H596 190 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 LPAR2Q9HBW0 351 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 PAK1IP1Q9NWT1 392 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 HIF1ANQ9NWT6 349 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 DHDHQ9UQ10 334 aa12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 POLR3KQ9Y2Y1 108 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-209ENST00000634889 HIVEP2P31629 2446 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 FAM230AA0A1W2PPH8 454 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 TNFRSF13BO14836 293 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 RHBDL1O75783 438 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 ALX3O95076 343 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 LALBAP00709 142 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 MT-ND2P03891 347 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 PRKACBP22694 351 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 MPZP25189 248 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 NPY4RP50391 375 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 BDH1Q02338 343 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 RBM48Q5RL73 367 aaKnown RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 SERPINA12Q8IW75 414 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 DEFB108BQ8NET1 73 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR5D14Q8NGL3 314 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 TRMT10AQ8TBZ6 339 aaKnown RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 TSEN15Q8WW01 171 aaKnown RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 SSBP3Q9BWW4 388 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 PKIBQ9C010 78 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 BLOC1S6Q9UL45 172 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 ZNF281Q9Y2X9 895 aa12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
CDC42BPB-209ENST00000634889 NF1P21359 2839 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 IGKV1-9A0A0C4DH69 117 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 AKR7A2O43488 359 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 DENRO43583 198 aaKnown RBP12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 NOS1APO75052 506 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 CRLF1O75462 422 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 CD1AP06126 327 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 CD2P06729 351 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 ACAA1P09110 424 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 ATF1P18846 271 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms