RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ODF4Q2M2E3 257 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 WDR38Q5JTN6 314 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 PRAMEF6Q5VXH4 476 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 IZUMO2Q6UXV1 221 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 BRD3OSQ6XYD6 125 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 ZDHHC23Q8IYP9 409 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 SYS1Q8N2H4 156 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 KIR3DL3Q8N743 410 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 PLPP7Q8NBV4 271 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 PIGCQ92535 297 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 HIST1H2AAQ96QV6 131 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 RTL8AQ9BWD3 113 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 PLEKHA1Q9HB21 404 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 ENPP5Q9UJA9 477 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 PIGLQ9Y2B2 252 aa12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 RRP15Q9Y3B9 282 aaKnown RBP12.95□□□□□ -0.34
SNRNP48-203ENST00000634363 IGHV2-70DA0A0C4DH43 119 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 FAM181BA6NEQ2 426 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 SYT7O43581 403 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 KNG1P01042 644 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 GRPP07492 148 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 UBCP0CG48 685 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 FAHP16930 419 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 PAX2Q02962 417 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 MRPL28Q13084 256 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 ZNF181Q2M3W8 571 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 DEFB112Q30KQ8 113 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 FAM201AQ5SY85 155 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 ZBTB37Q5TC79 503 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 EGFL6Q8IUX8 553 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 OR2G2Q8NGZ5 317 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 UPRTQ96BW1 309 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 PELI1Q96FA3 418 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 NEIL1Q96FI4 390 aaPredicted RBP12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 TMEM246Q9BRR3 403 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 JAM3Q9BX67 310 aa12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 CHCHD3Q9NX63 227 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-203ENST00000634363 KIR2DS1A0A191URI9 304 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 hCG_1807616A0A1W2PRN6 198 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 DHRS7CA6NNS2 312 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 PTBP3O95758 552 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 PLATP00750 562 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 PPIAL4GP0DN37 164 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 MPPED2Q15777 294 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 TMPRSS11AQ6ZMR5 421 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 C17orf107Q6ZR85 190 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 KCTD8Q6ZWB6 473 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 PRSS35Q8N3Z0 413 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 CCDC54Q8NEL0 328 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 BPIFB6Q8NFQ5 453 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 OR8B3Q8NGG8 313 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 Q8TCH9 128 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 HAVCR2Q8TDQ0 301 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 FBLIM1Q8WUP2 373 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 ITPKCQ96DU7 683 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 OR8B2Q96RD0 313 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 NUDT16L1Q9BRJ7 211 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 DIMT1Q9UNQ2 313 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 EXOSC1Q9Y3B2 195 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 V9GYS6 101 aa12.93□□□□□ -0.34
SNRNP48-203ENST00000634363 A0A1B0GTI1 187 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 LOC107986453A0A1B0GWG9 222 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 TMEM210A6NLX4 147 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 H3BSH0 61 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 XPNPEP2O43895 674 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 PIPP12273 146 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 CCL1P22362 96 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 VHLP40337 213 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 KIR3DL2P43630 455 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 PITPNBP48739 271 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 GBX2P52951 348 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 FGF12P61328 243 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 CEP78Q5JTW2 689 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 TMEM244Q5VVB8 128 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 PLCXD3Q63HM9 321 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 FDX2Q6P4F2 183 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 FIP1L1Q6UN15 594 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 NLRC3Q7RTR2 1065 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 C19orf18Q8NEA5 215 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 OR14K1Q8NGZ2 314 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 OR5P3Q8WZ94 311 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 PPP1R3EQ9H7J1 279 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 ISG20L2Q9H9L3 353 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 BEX1Q9HBH7 125 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 C1orf123Q9NWV4 160 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 CNOT2Q9NZN8 540 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 FRRS1LQ9P0K9 344 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 RNF7Q9UBF6 113 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 CAB39Q9Y376 341 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-203ENST00000634363 NRASP01111 189 aa12.91□□□□□ -0.34
SNRNP48-203ENST00000634363 CCDC159P0C7I6 412 aa12.91□□□□□ -0.34
SNRNP48-203ENST00000634363 LIMS3P0CW19 117 aa12.91□□□□□ -0.34
SNRNP48-203ENST00000634363 LIMS4P0CW20 117 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms