RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 EFCAB1Q9HAE3 211 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF446Q9NWS9 450 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 TBL2Q9Y4P3 447 aaKnown RBP16.2■□□□□ 0.18
TARDBP-228ENST00000629725 V9GYQ6 96 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 SYNGR1O43759 233 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 ARG1P05089 322 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 CLUP10909 449 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 CCL3L1P16619 93 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 SPI1P17947 270 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 BLVRAP53004 296 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 EGFEM1PQ0D2K5 195 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 CRMP1Q14194 572 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 OR4M1Q8NGD0 313 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF671Q8TAW3 534 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 ABHD6Q9BV23 337 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 IL20Q9NYY1 176 aa16.19■□□□□ 0.18
TARDBP-228ENST00000629725 CCDC22O60826 627 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 GMNNO75496 209 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 SEMG1P04279 462 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 HOXD3P31249 432 aaPredicted RBP16.18■□□□□ 0.18
TARDBP-228ENST00000629725 RRM2P31350 389 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 NUDT2P50583 147 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF561Q8N587 486 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 OR6N2Q8NGY6 317 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 OR2T27Q8NH04 317 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 PYURFQ96I23 114 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 NMNAT2Q9BZQ4 307 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 OR51I2Q9H344 312 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 ABCD2Q9UBJ2 740 aa16.18■□□□□ 0.18
TARDBP-228ENST00000629725 TSSC4Q9Y5U2 329 aaPredicted RBP16.18■□□□□ 0.18
TARDBP-228ENST00000629725 TCRBV4S1A1TA0A5B7 111 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 RFPL4AA6NLU0 287 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF732B4DXR9 585 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 RFPL4AL1F8VTS6 287 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 F2RL2O00254 374 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 SLC1A7O00341 560 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 MTRF1O75570 445 aaKnown RBP16.17■□□□□ 0.18
TARDBP-228ENST00000629725 H2BFMP0C1H6 154 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 OPRL1P41146 370 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 GNG3P63215 75 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF273Q14593 569 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 HACD2Q6Y1H2 254 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 CCDC121Q6ZUS5 278 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 CENPVQ7Z7K6 275 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-228ENST00000629725 CALHM1Q8IU99 346 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 ERI1Q8IV48 349 aaKnown RBP16.17■□□□□ 0.18
TARDBP-228ENST00000629725 MCUR1Q96AQ8 359 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 INTS14Q96SY0 518 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 C1orf21Q9H246 121 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 RASL12Q9NYN1 266 aa16.17■□□□□ 0.18
TARDBP-228ENST00000629725 ODF3BA8MYP8 253 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 CLIC3O95833 236 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 DYNLT3P51808 116 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 TCTEX1D4Q5JR98 221 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 CEP78Q5JTW2 689 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 LINC01590Q5TEZ4 76 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 ACP7Q6ZNF0 438 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.16■□□□□ 0.18
TARDBP-228ENST00000629725 CD177Q8N6Q3 437 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 OR8D4Q8NGM9 314 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 OR13D1Q8NGV5 346 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 DPF1Q92782 380 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 LYZL4Q96KX0 146 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 AMELYQ99218 206 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 GORASP2Q9H8Y8 452 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 INPP5EQ9NRR6 644 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 TBC1D23Q9NUY8 699 aa16.16■□□□□ 0.18
TARDBP-228ENST00000629725 FABP3P05413 133 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 PRDX2P32119 198 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 PSME3P61289 254 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 SMIM21Q3B7S5 101 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 CEACAM21Q3KPI0 293 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 LDLRAD2Q5SZI1 272 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF626Q68DY1 528 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 LINC00471Q8N535 108 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 AQP3Q92482 292 aa16.15■□□□□ 0.18
TARDBP-228ENST00000629725 C17orf98A8MV24 154 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 H3BUI4 141 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 OR12D2P58182 307 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 DCTN2Q13561 401 aaKnown RBP16.14■□□□□ 0.17
TARDBP-228ENST00000629725 HSP90B2PQ58FF3 399 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 HAGHLQ6PII5 290 aaPredicted RBP16.14■□□□□ 0.17
TARDBP-228ENST00000629725 SHFQ7M4L6 423 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 OR9Q2Q8NGE9 314 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 FAM81AQ8TBF8 368 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 MYDGFQ969H8 173 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 BTBD10Q9BSF8 475 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 TSSK6Q9BXA6 273 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 GPR61Q9BZJ8 451 aa16.14■□□□□ 0.17
TARDBP-228ENST00000629725 PIPP12273 146 aaPredicted RBP16.13■□□□□ 0.17
TARDBP-228ENST00000629725 AZGP1P25311 298 aaKnown RBP16.13■□□□□ 0.17
TARDBP-228ENST00000629725 GSTT1P30711 240 aa16.13■□□□□ 0.17
TARDBP-228ENST00000629725 CEBPDP49716 269 aaPredicted RBP16.13■□□□□ 0.17
TARDBP-228ENST00000629725 DLX6P56179 175 aa16.13■□□□□ 0.17
TARDBP-228ENST00000629725 DYNC1I2Q13409 638 aaKnown RBP16.13■□□□□ 0.17
TARDBP-228ENST00000629725 DMRTC1Q5HYR2 192 aa16.13■□□□□ 0.17
TARDBP-228ENST00000629725 SAMD4BQ5PRF9 694 aaKnown RBP16.13■□□□□ 0.17
TARDBP-228ENST00000629725 LCN8Q6JVE9 175 aa16.13■□□□□ 0.17
TARDBP-228ENST00000629725 RASSF6Q6ZTQ3 369 aa16.13■□□□□ 0.17
TARDBP-228ENST00000629725 RNF148Q8N7C7 305 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms