RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 MGAT4AQ9UM21 535 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 EP300Q09472 2414 aaPredicted RBP19.1■□□□□ 0.65
PNKP-220ENST00000627232 HTR3BO95264 441 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 CSTBP04080 98 aaKnown RBP19.09■□□□□ 0.65
PNKP-220ENST00000627232 NKPD1Q17RQ9 610 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 PLCXD3Q63HM9 321 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 MUC20Q8N307 709 aaPredicted RBP19.09■□□□□ 0.65
PNKP-220ENST00000627232 ZADH2Q8N4Q0 377 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 CHST6Q9GZX3 395 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 PCDHB16Q9NRJ7 776 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 PLSCR2Q9NRY7 297 aa19.09■□□□□ 0.65
PNKP-220ENST00000627232 H3BUI4 141 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 IFNA6P05013 189 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 CSN2P05814 226 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 OR4E1P0C645 316 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 CCNOP22674 350 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 PRSS12P56730 875 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 GK2Q14410 553 aaPredicted RBP19.08■□□□□ 0.64
PNKP-220ENST00000627232 C4orf46Q504U0 113 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 IGFL3Q6UXB1 125 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 MRPL21Q7Z2W9 205 aaKnown RBP19.08■□□□□ 0.64
PNKP-220ENST00000627232 HOGA1Q86XE5 327 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 CSNK2A3Q8NEV1 391 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 OR2AK2Q8NG84 335 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 OR2T35Q8NGX2 323 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 MRPS24Q96EL2 167 aaKnown RBP19.08■□□□□ 0.64
PNKP-220ENST00000627232 POM121Q96HA1 1249 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 PIPOXQ9P0Z9 390 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 HSPB11Q9Y547 144 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 MED12LQ86YW9 2145 aa19.08■□□□□ 0.64
PNKP-220ENST00000627232 AKR7A2O43488 359 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 SPRY1O43609 319 aaPredicted RBP19.07■□□□□ 0.64
PNKP-220ENST00000627232 APLNRP35414 380 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 PDZK1IP1Q13113 114 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 GUSBP1Q15486 140 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 MPPED2Q15777 294 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 CCDC36Q8IYA8 594 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 ARRDC1Q8N5I2 433 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 ZSCAN4Q8NAM6 433 aaPredicted RBP19.07■□□□□ 0.64
PNKP-220ENST00000627232 OR11H4Q8NGC9 324 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 ASB13Q8WXK3 278 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 FBXW5Q969U6 566 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 CA10Q9NS85 328 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 HSF4Q9ULV5 492 aa19.07■□□□□ 0.64
PNKP-220ENST00000627232 PROB1E7EW31 1015 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 CST4P01036 141 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 MICBQ29980 383 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 HIKESHIQ53FT3 197 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 TFAP2EQ6VUC0 442 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 OR56B2PQ8NGI1 322 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 RADILQ96JH8 1075 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 VSIG4Q9Y279 399 aa19.06■□□□□ 0.64
PNKP-220ENST00000627232 G3V3Q6 166 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 ANGPTL7O43827 346 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 SNAPC5O75971 98 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 CNOT4O95628 575 aaKnown RBP19.05■□□□□ 0.64
PNKP-220ENST00000627232 PMP2P02689 132 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 TAS2R46P59540 309 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 ZNF169Q14929 603 aaPredicted RBP19.05■□□□□ 0.64
PNKP-220ENST00000627232 FAHD2BQ6P2I3 314 aaPredicted RBP19.05■□□□□ 0.64
PNKP-220ENST00000627232 FAM214BQ7L5A3 538 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 TMED4Q7Z7H5 227 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 SLC25A42Q86VD7 318 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 MRGPRFQ96AM1 343 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 FAHD2AQ96GK7 314 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 FAM210AQ96ND0 272 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 TRIB1Q96RU8 372 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 ZNF850A8MQ14 1090 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 GSTT2P0CG29 244 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 CCL2P13500 99 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 AMY2BP19961 511 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 TGFBR3Q03167 851 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 C12orf45Q8N5I9 185 aaPredicted RBP19.05■□□□□ 0.64
PNKP-220ENST00000627232 OR5H2Q8NGV7 314 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 WNT2BQ93097 391 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 GPR137Q96N19 417 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 ZNF75AQ96N20 296 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 PLEKHJ1Q9NW61 149 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 STARD10Q9Y365 291 aa19.05■□□□□ 0.64
PNKP-220ENST00000627232 IGKV1-12A0A0C4DH73 117 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 J3QW42 95 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 EFSO43281 561 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 IGKV1D-12P01611 117 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 GABRR1P24046 479 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 MDP1Q86V88 176 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 OSR2Q8N2R0 312 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 FTMTQ8N4E7 242 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 OR5L1Q8NGL2 311 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 GRPEL2Q8TAA5 225 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 CHIAQ9BZP6 476 aa19.04■□□□□ 0.64
PNKP-220ENST00000627232 PQLC2LA1A4F0 135 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 FIGNL2A6NMB9 653 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 OR2AT4A6NND4 320 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 CEACAM18A8MTB9 384 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 HOXB1P14653 301 aaPredicted RBP19.03■□□□□ 0.64
PNKP-220ENST00000627232 EIF2S3P41091 472 aaKnown RBP19.03■□□□□ 0.64
PNKP-220ENST00000627232 DHODHQ02127 395 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 PRDX4Q13162 271 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 SIGIRRQ6IA17 410 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 TMEM17Q86X19 198 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms