RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DUX4Q9UBX2 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 GPR160Q9UJ42 338 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 WDFY4Q6ZS81 3184 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 FAM25EA8MYX2 175 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 TERTO14746 1132 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 BET1O15155 118 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 SERPINA7P05543 415 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 ZNF883P0CG24 379 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 ECI1P42126 302 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 GFRA1P56159 465 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 IL15RAQ13261 267 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 ANKRD55Q3KP44 614 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 PAN3Q58A45 887 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 DMRTC1Q5HYR2 192 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 ACER2Q5QJU3 275 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 SLC38A6Q8IZM9 456 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 RELL2Q8NC24 303 aaPredicted RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 OR10K1Q8NGX5 313 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 EMG1Q92979 244 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 PIGTQ969N2 578 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 CPNE2Q96FN4 548 aaPredicted RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 REEP6Q96HR9 211 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 ZNF75AQ96N20 296 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 S100A13Q99584 98 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 SPRY4Q9C004 299 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 HSF4Q9ULV5 492 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 C5orf51A6NDU8 294 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 EEF1E1-BLOC1S5C9J1V9 151 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 MSTNO14793 375 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 OR3A2P47893 321 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 RPS18P62269 152 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 NAAAQ02083 359 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 NRN1LQ496H8 165 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 ZNF774Q6NX45 483 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 RPUSD3Q6P087 351 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 C6orf15Q6UXA7 325 aaPredicted RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 CSNK2A3Q8NEV1 391 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 OR10D3Q8NH80 312 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 OR2V1Q8NHB1 315 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 CT55Q8WUE5 264 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 MRPS24Q96EL2 167 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 PIK3IP1Q96FE7 263 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 RGCCQ9H4X1 137 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 DEPPQ9NTK1 212 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 EHFQ9NZC4 300 aa8.22□□□□□ -1.09
PDPN-212ENST00000621990 MCTS1Q9ULC4 181 aaKnown RBP8.22□□□□□ -1.09
PDPN-212ENST00000621990 IGKV1-27A0A075B6S5 117 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 H0YIZ8 118 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 CYTIPO60759 359 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 CNR1P21554 472 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 PRKACBP22694 351 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 OTX2P32243 289 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 MTCP1P56278 107 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 FOXO1Q12778 655 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 SNTB1Q13884 538 aaKnown RBP8.21□□□□□ -1.09
PDPN-212ENST00000621990 ATXN7L3Q14CW9 347 aaPredicted RBP8.21□□□□□ -1.09
PDPN-212ENST00000621990 PLXDC2Q6UX71 529 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 AAED1Q7RTV5 226 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 TIPARPQ7Z3E1 657 aaKnown RBP8.21□□□□□ -1.09
PDPN-212ENST00000621990 PSMF1Q92530 271 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 TMEM45BQ96B21 275 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 ZNF471Q9BX82 626 aaPredicted RBP8.21□□□□□ -1.09
PDPN-212ENST00000621990 GPR173Q9NS66 373 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 GLS2Q9UI32 602 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 EDARQ9UNE0 448 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 LOXL2Q9Y4K0 774 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 SPEF1Q9Y4P9 236 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 CSAG2Q9Y5P2 127 aa8.21□□□□□ -1.09
PDPN-212ENST00000621990 CXCL13O43927 109 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 ZNF32P17041 273 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 PPIAP62937 165 aaKnown RBP8.21□□□□□ -1.1
PDPN-212ENST00000621990 PSG4Q00888 419 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 CNN3Q15417 329 aaKnown RBP8.21□□□□□ -1.1
PDPN-212ENST00000621990 CHRFAM7AQ494W8 412 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 FAM74A1Q5RGS3 127 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 TFAP2EQ6VUC0 442 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 C6orf201Q7Z4U5 140 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 ZSCAN4Q8NAM6 433 aaPredicted RBP8.21□□□□□ -1.1
PDPN-212ENST00000621990 SLC30A7Q8NEW0 376 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 OR2AE1Q8NHA4 323 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 CPNE4Q96A23 557 aaPredicted RBP8.21□□□□□ -1.1
PDPN-212ENST00000621990 RRNAD1Q96FB5 475 aaKnown RBP8.21□□□□□ -1.1
PDPN-212ENST00000621990 FOXB1Q99853 325 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 DDA1Q9BW61 102 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 OR2H1Q9GZK4 316 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 METTL9Q9H1A3 318 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 IL36GQ9NZH8 169 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 TIMM10BQ9Y5J6 103 aa8.21□□□□□ -1.1
PDPN-212ENST00000621990 IGKV1D-8A0A087WSZ0 117 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 C13orf42A0A1B0GVH6 325 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 LINC01387J3KSC0 135 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 SDCBPO00560 298 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 FGF16O43320 207 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PGAM2P15259 253 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 B4GALT1P15291 398 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 TCN2P20062 427 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 DTYMKP23919 212 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 CYB561P49447 251 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PCBD1P61457 104 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms