RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 SLC7A5P1Q8MH63 180 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 BBS1Q8NFJ9 593 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 OR10AD1Q8NGE0 317 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 OR8B3Q8NGG8 313 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 MOSPD2Q8NHP6 518 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 SLC7A6Q92536 515 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CMBLQ96DG6 245 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CHIAQ9BZP6 476 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 TXNIPQ9H3M7 391 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 TUBG2Q9NRH3 451 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 RBMX2Q9Y388 322 aaKnown RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 FABP12A6NFH5 140 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 IFNL4K9M1U5 179 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 PIP5K1CO60331 668 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 DOK2O60496 412 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CYB5R3P00387 301 aaPredicted RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 RBM34P42696 430 aaKnown RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 HTR5AP47898 357 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 PITPNBP48739 271 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CAV3P56539 151 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 FGF12P61328 243 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 PPP3R1P63098 170 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 BDH1Q02338 343 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NDUFA5Q16718 116 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CLEC12AQ5QGZ9 265 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 RSBN1Q5VWQ0 802 aaPredicted RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 FAM205BPQ63HN1 556 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 ZNF322Q6U7Q0 402 aaPredicted RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 LHFPL3Q86UP9 236 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NR2C2APQ86WQ0 139 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 OR5AS1Q8N127 324 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 ZFP41Q8N8Y5 198 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 TMEM239Q8WW34 195 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 AP3S1Q92572 193 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NEIL1Q96FI4 390 aaPredicted RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 DIRAS2Q96HU8 199 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 KCNJ15Q99712 375 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NUDT16L1Q9BRJ7 211 aaKnown RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 ALG12Q9BV10 488 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 SLC22A4Q9H015 551 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 MMP28Q9H239 520 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NOX4Q9NPH5 578 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CLN8Q9UBY8 286 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 ZNF221Q9UK13 617 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 ZNF281Q9Y2X9 895 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 MED31Q9Y3C7 131 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 RNF114Q9Y508 228 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 SIRT4Q9Y6E7 314 aaPredicted RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 PRKDCP78527 4128 aaKnown RBP6.52□□□□□ -1.37
CLK1-215ENST00000621181 IGHV3-64DA0A0J9YX35 117 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 KIR2DS1A0A191URI9 304 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 FAM172BPA6NC97 362 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 CCDC182A6NF36 153 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 LRRC30A6NM36 301 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 GABRPO00591 440 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 BHLHE40O14503 412 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 SGCEO43556 437 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 NDUFA7O95182 113 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 IGF2P01344 180 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 HMGN1P05114 100 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 COX5BP10606 129 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 SELEP16581 610 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 HLA-DMAP28067 261 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 GPR4P46093 362 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 BPIFB3P59826 476 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 RPL15P61313 204 aaKnown RBP6.52□□□□□ -1.37
CLK1-215ENST00000621181 RPL27P61353 136 aaKnown RBP6.52□□□□□ -1.37
CLK1-215ENST00000621181 SCRN3Q0VDG4 424 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 ENDOGQ14249 297 aaKnown RBP6.52□□□□□ -1.37
CLK1-215ENST00000621181 INSL4Q14641 139 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 TAF9Q16594 264 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 CNIH2Q6PI25 160 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 Q6YL49 198 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 RHOUQ7L0Q8 258 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 SYT9Q86SS6 491 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 C1orf87Q8N0U7 546 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 SPRYD4Q8WW59 207 aaPredicted RBP6.52□□□□□ -1.37
CLK1-215ENST00000621181 SSMEM1Q8WWF3 244 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 LIPHQ8WWY8 451 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 RFKQ969G6 155 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 HAVCR1Q96D42 359 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 TMEM246Q9BRR3 403 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 PCGF1Q9BSM1 259 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 PRRG3Q9BZD7 231 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 PRDM13Q9H4Q3 707 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 ASH2LQ9UBL3 628 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 GSTK1Q9Y2Q3 226 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 STARD10Q9Y365 291 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 POMT1Q9Y6A1 747 aa6.52□□□□□ -1.37
CLK1-215ENST00000621181 PHYHO14832 338 aa6.51□□□□□ -1.37
CLK1-215ENST00000621181 ENSAO43768 121 aaKnown RBP6.51□□□□□ -1.37
CLK1-215ENST00000621181 HPGDSO60760 199 aa6.51□□□□□ -1.37
CLK1-215ENST00000621181 PTP4A3O75365 173 aa6.51□□□□□ -1.37
CLK1-215ENST00000621181 HLA-DPB1P04440 258 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms