RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SPINK2P20155 84 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 CPT2P23786 658 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 GABRR1P24046 479 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 FUT6P51993 359 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 CXADRP78310 365 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 FAM214BQ7L5A3 538 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 MRPL21Q7Z2W9 205 aaKnown RBP14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 Q96M66 194 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 TMEM246Q9BRR3 403 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 TRAF4Q9BUZ4 470 aaPredicted RBP14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 PLSCR2Q9NRY7 297 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 MGAT4CQ9UBM8 478 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 LAMA5O15230 3695 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 TMEM82A0PJX8 343 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 PMP2P02689 132 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 PDGFAP04085 211 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 APLNRP35414 380 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 ATP1B3P54709 279 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 MALLQ13021 153 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 C9orf106Q8NAJ2 232 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 ZFAND1Q8TCF1 268 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 SLC25A21Q9BQT8 299 aaPredicted RBP14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 PAPOLGQ9BWT3 736 aaKnown RBP14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 ZNF436Q9C0F3 470 aaPredicted RBP14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 DLL4Q9NR61 685 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 CA10Q9NS85 328 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 ANAPC10Q9UM13 185 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 PLEKHA6Q9Y2H5 1048 aa14.98□□□□□ -0.01
PCDHGC3-205ENST00000617641 IGKV1-12A0A0C4DH73 117 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 IGKV1D-12P01611 117 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 CSTBP04080 98 aaKnown RBP14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 IGHV1-2P23083 117 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 WNT5AP41221 380 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 GUSBP1Q15486 140 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 ZBTB37Q5TC79 503 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 IGFL3Q6UXB1 125 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 TMED4Q7Z7H5 227 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 CNEP1R1Q8N9A8 125 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 NANOS1Q8WY41 292 aaKnown RBP14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 FBXW5Q969U6 566 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 OR51B6Q9H340 312 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 PTPRZ1P23471 2315 aaPredicted RBP14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 BOD1L1Q8NFC6 3051 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 A0A1W2PR80 420 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 UBE2MP61081 183 aaKnown RBP14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 ATPAF1Q5TC12 328 aaPredicted RBP14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 NLRC3Q7RTR2 1065 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 DPPA2Q7Z7J5 298 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 OR4K15Q8NH41 348 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 ST8SIA4Q92187 359 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 HYLS1Q96M11 299 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 PRRT1Q99946 306 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 CHIAQ9BZP6 476 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 SLC2A8Q9NY64 477 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 ZNF581Q9P0T4 197 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 NPTNQ9Y639 398 aa14.97□□□□□ -0.01
PCDHGC3-205ENST00000617641 K7EM74 188 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 LYZL6O75951 148 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 ARPC4P59998 168 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 PDZK1IP1Q13113 114 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 MICBQ29980 383 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 C4orf46Q504U0 113 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 LAMTOR1Q6IAA8 161 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 ASCL4Q6XD76 172 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 C17orf107Q6ZR85 190 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 C6orf201Q7Z4U5 140 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 MUC20Q8N307 709 aaPredicted RBP14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 SNIP1Q8TAD8 396 aaKnown RBP14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 MRGPRFQ96AM1 343 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 ZNF75AQ96N20 296 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 OCSTAMPQ9BR26 566 aa14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 EIF3KQ9UBQ5 218 aaKnown RBP14.96□□□□□ -0.01
PCDHGC3-205ENST00000617641 UBE2QL1A1L167 161 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 FAM172BPA6NC97 362 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 AKR7A2O43488 359 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 KIR2DL2P43627 348 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 PRDX4Q13162 271 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 TAF9Q16594 264 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 NKAPLQ5M9Q1 402 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 VWA1Q6PCB0 445 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 MYPOPQ86VE0 399 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 CALHM1Q8IU99 346 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 SPICQ8N5J4 248 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 SLC30A7Q8NEW0 376 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR11H4Q8NGC9 324 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 TECTBQ96PL2 329 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF629Q9UEG4 869 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF230Q9UIE0 474 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 VSIG4Q9Y279 399 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 SERPINA5P05154 406 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 TBPP20226 339 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 MPZP25189 248 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 SNRPD2P62316 118 aaKnown RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 ACSF3Q4G176 576 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 SIGIRRQ6IA17 410 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 RFPL4BQ6ZWI9 263 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 UXS1Q8NBZ7 420 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 MAFIPQ8WZ33 124 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 WBP1Q96G27 269 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms