RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 Q6ZPB1 254 aaPredicted RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 SLC25A40Q8TBP6 338 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 ADGRL4Q9HBW9 690 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 TAS2R4Q9NYW5 299 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 SLC45A2Q9UMX9 530 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 H0Y8X5 98 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 TSPAN31Q12999 210 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 FBXL16Q8N461 479 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 SLC45A3Q96JT2 553 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 RTTNQ86VV8 2226 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 AESQ08117 197 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 OR2T2Q6IF00 324 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 OR52N4Q8NGI2 321 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 MRGPRX4Q96LA9 322 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 SPAARA0A1B0GVQ0 90 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 A0A1W2PPQ1 181 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 GLULP15104 373 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 EVX2Q03828 476 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 TRA2AQ13595 282 aaKnown RBP eCLIP11.38□□□□□ -0.59
TCF4-248ENST00000616053 TMEM183AQ8IXX5 376 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 MALP21145 153 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 GPR3P46089 330 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 FOXO1Q12778 655 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 SSX1Q16384 188 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 KLHDC8BQ8IXV7 354 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 PQLC3Q8N755 202 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 SPPL3Q8TCT6 385 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 PDLIM7Q9NR12 457 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 A0A1B0GUH1 482 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 LMX1BO60663 402 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 TTRP02766 147 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 CAMPP49913 170 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 FUT6P51993 359 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 MMDQ15546 238 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 MYPOPQ86VE0 399 aaPredicted RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 CCR5P51681 352 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 LRRTM3Q86VH5 581 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 FGF11Q92914 225 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 GABARAPL3Q9BY60 117 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 NDUFB11Q9NX14 153 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 FOXJ3Q9UPW0 622 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 A0A1W2PPC4 97 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 OR4C46A6NHA9 309 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 C1SP09871 688 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 TEAD1P28347 426 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 HLXQ14774 488 aaPredicted RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 IGHV3-43A0A0B4J1X8 118 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 SDHDO14521 159 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 ZNF205O95201 554 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 IGHV3-43DP0DP04 118 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 HIST1H1BP16401 226 aaKnown RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 PTGFRP43088 359 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 SNRNP40Q96DI7 357 aaKnown RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 KIR3DX1Q9H7L2 352 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 DISP1Q96F81 1524 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 A0A1B0GU03 582 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 LIM2P55344 173 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 OR2B8PP59922 312 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 ST8SIA1Q92185 356 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 UBQLN3Q9H347 655 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 AKIRIN1Q9H9L7 192 aaPredicted RBP11.37□□□□□ -0.59
TCF4-248ENST00000616053 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
TCF4-248ENST00000616053 LOC107986453A0A1B0GWG9 222 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 H0YIG0 161 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 C16orf97H3BN30 126 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 ICOSLGO75144 302 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 ZNF688P0C7X2 276 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 RTN4RQ9BZR6 473 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 SH3BGRL3Q9H299 93 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 CCL26Q9Y258 94 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 SOD1P00441 154 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 FZD2Q14332 565 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 GDNFP39905 211 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 TM4SF4P48230 202 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 SLA2Q9H6Q3 261 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 LYRM4Q9HD34 91 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 DDOSTP39656 456 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 HTR6P50406 440 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 FOXB1Q99853 325 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 HDGFL3Q9Y3E1 203 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 HOXD9P28356 352 aaPredicted RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 GEMIN7Q9H840 131 aaKnown RBP11.36□□□□□ -0.59
TCF4-248ENST00000616053 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 LRP3O75074 770 aa11.36□□□□□ -0.59
TCF4-248ENST00000616053 PAPLNO95428 1278 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms