RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ACOT7LQ6ZUV0 252 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 NAA40Q86UY6 237 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 LGI3Q8N145 548 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 EXTL1Q92935 676 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SGK3Q96BR1 496 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PPP1R3EQ9H7J1 279 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 AADACP22760 399 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 PMP22Q01453 160 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 CLN3Q13286 438 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 WFDC8Q8IUA0 241 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 OR1S2Q8NGQ3 325 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC17A5Q9NRA2 495 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 AK3Q9UIJ7 227 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 H3BUI4 141 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 GEMIN2O14893 280 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TTRP02766 147 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 ECI1P42126 302 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TERB2Q8NHR7 220 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 MAP6Q96JE9 813 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 ADAT1Q9BUB4 502 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 RAB33BQ9H082 229 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TREM2Q9NZC2 230 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 PURGQ9UJV8 347 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 VSIG4Q9Y279 399 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TICRRQ7Z2Z1 1910 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM265A0A087WTH1 108 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 SH2D1BO14796 132 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 IGF2P01344 180 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 COX6A1P12074 109 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 PTGER4P35408 488 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 MZT1Q08AG7 82 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 PEA15Q15121 130 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2W3Q7Z3T1 314 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM200AQ86VY9 491 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2M7Q8NG81 312 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 OR4A16Q8NH70 328 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 BCL2L11O43521 198 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 IL5P05113 134 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 LPCAT3Q6P1A2 487 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 SEZ6L2Q6UXD5 910 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF519Q8TB69 540 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 RNF133Q8WVZ7 376 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 MARC2Q969Z3 335 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 KIRREL1Q96J84 757 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 B3GAT1Q9P2W7 334 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 IGLV1-36A0A0B4J1U3 117 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 IGKV1D-43A0A0B4J1Z2 117 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 RPL12P30050 165 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 CALCRP30988 508 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 PXDC1Q5TGL8 231 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 ST8SIA2Q92186 375 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 FOXJ2Q9P0K8 574 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 EDARQ9UNE0 448 aa7.87□□□□□ -1.15
PDLIM5-222ENST00000615540 SPRY3O43610 288 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2F2O95006 317 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SERPINA7P05543 415 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 FPR2P25090 351 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM267Q0VDI3 215 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2F1Q13607 317 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SCCPDHQ8NBX0 429 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2G3Q8NGZ4 309 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 TTTY12Q9BZ98 90 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2H1Q9GZK4 316 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 KCNJ16Q9NPI9 418 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 A0A1W2PP11 408 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 RNF212BA8MTL3 300 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 WDR1O75083 606 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 LYPD3O95274 346 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SNAPINO95295 136 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 VSIG10L2P0DP72 767 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 VSIG8P0DPA2 414 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 KLK2P20151 261 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SSBP1Q04837 148 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF573Q86YE8 665 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF610Q8N9Z0 462 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 ZBTB44Q8NCP5 570 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 FBXW5Q969U6 566 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 MS4A3Q96HJ5 214 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 GPR35Q9HC97 309 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 PLXNA2O75051 1894 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 A0A0J9YW62 118 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 RFPL4AA6NLU0 287 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 RFPL4AL1F8VTS6 287 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF83P51522 516 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 RAB5BP61020 215 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SPINK9Q5DT21 86 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 ATPAF1Q5TC12 328 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC25A38Q96DW6 304 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 C2orf50Q96LR7 162 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 ADAP1O75689 374 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 IGHV3-13P01766 116 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 IGHV3-7P01780 117 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 IGKV3-11P04433 115 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 NKX2-1P43699 371 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC38A6Q8IZM9 456 aa7.86□□□□□ -1.15
PDLIM5-222ENST00000615540 APOBEC3DQ96AK3 386 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms