RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SPTSSAQ969W0 71 aa5.32□□□□□ -1.56
MUC1-227ENST00000615517 ST6GALNAC6Q969X2 333 aa5.32□□□□□ -1.56
MUC1-227ENST00000615517 SGK3Q96BR1 496 aa5.32□□□□□ -1.56
MUC1-227ENST00000615517 MICU1Q9BPX6 476 aa5.32□□□□□ -1.56
MUC1-227ENST00000615517 POLR2J2Q9GZM3 115 aaKnown RBP5.32□□□□□ -1.56
MUC1-227ENST00000615517 POLR2J3Q9H1A7 115 aaKnown RBP5.32□□□□□ -1.56
MUC1-227ENST00000615517 PPCSQ9HAB8 311 aa5.32□□□□□ -1.56
MUC1-227ENST00000615517 SRA1Q9HD15 236 aaKnown RBP5.32□□□□□ -1.56
MUC1-227ENST00000615517 NRIP3Q9NQ35 241 aa5.32□□□□□ -1.56
MUC1-227ENST00000615517 MRPL22Q9NWU5 206 aaKnown RBP5.32□□□□□ -1.56
MUC1-227ENST00000615517 SIRT4Q9Y6E7 314 aaPredicted RBP5.32□□□□□ -1.56
MUC1-227ENST00000615517 HTR3EA5X5Y0 456 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 TMEM210A6NLX4 147 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 ZNF850A8MQ14 1090 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 EVPLLA8MZ36 301 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 M0QZK8 103 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 XRCC2O43543 280 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 SAP30O75446 220 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 MMP23AO75900 390 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 IGHG2P01859 326 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 TK1P04183 234 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 VIMP08670 466 aaKnown RBP5.31□□□□□ -1.56
MUC1-227ENST00000615517 ZNF728P0DKX0 622 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 HTR1DP28221 377 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 NOS3P29474 1203 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 BRS3P32247 399 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 GPR4P46093 362 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 POU3F4P49335 361 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 GSK3AP49840 483 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 PRKXP51817 358 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 FXYD6P3P58550 94 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 SLC35B1P78383 322 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 IL18R1Q13478 541 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 SNAPC1Q16533 368 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 PNLIPRP3Q17RR3 467 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 ZBED5Q49AG3 693 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 RNLSQ5VYX0 342 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 TBPL2Q6SJ96 375 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 DLEU7Q6UYE1 221 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 ACP7Q6ZNF0 438 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 CCDC80Q76M96 950 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 PATL1Q86TB9 770 aaKnown RBP5.31□□□□□ -1.56
MUC1-227ENST00000615517 C17orf53Q8N3J3 647 aaPredicted RBP5.31□□□□□ -1.56
MUC1-227ENST00000615517 ZNF561Q8N587 486 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 C5orf56Q8N8D9 126 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 OR2AJ1Q8NGZ0 328 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 C4orf3Q8WVX3 66 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 UBLCP1Q8WVY7 318 aaPredicted RBP5.31□□□□□ -1.56
MUC1-227ENST00000615517 DCUN1D4Q92564 292 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 OR8B4Q96RC9 309 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 OR52B2Q96RD2 323 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 ST6GALNAC5Q9BVH7 336 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 RTL8AQ9BWD3 113 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 PAPOLGQ9BWT3 736 aaKnown RBP5.31□□□□□ -1.56
MUC1-227ENST00000615517 C1orf21Q9H246 121 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 OPA3Q9H6K4 179 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 ZNF319Q9P2F9 582 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 DPM3Q9P2X0 92 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 CORO2BQ9UQ03 480 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 MOB4Q9Y3A3 225 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 IER3IP1Q9Y5U9 82 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 HSPE1-MOB4S4R3N1 261 aa5.31□□□□□ -1.56
MUC1-227ENST00000615517 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 MAGEA13PA6NCF6 341 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A18PA6NE21 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A16PA6NEW6 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A20PA6NIJ5 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A9PA6NNJ1 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A12PA8MX19 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A5PA8MXJ8 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 UBDO15205 165 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 BIRC5O15392 142 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 TBX1O43435 398 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 BRI3O95415 125 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 TXNDC12O95881 172 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A15PP0C7V4 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A13PP0C7W8 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A14PP0C7W9 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM90A24PP0C7X0 464 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 KITP10721 976 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 CRABP1P29762 137 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 PRDX2P32119 198 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 GZMMP51124 257 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 PRDX4Q13162 271 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 STX3Q13277 289 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FOXE3Q13461 319 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 CXorf66Q5JRM2 361 aaPredicted RBP5.3□□□□□ -1.56
MUC1-227ENST00000615517 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
MUC1-227ENST00000615517 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 GPR139Q6DWJ6 353 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 FAM53AQ6NSI3 398 aaPredicted RBP5.3□□□□□ -1.56
MUC1-227ENST00000615517 SMARCD3Q6STE5 483 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 KCTD8Q6ZWB6 473 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 ADCK1Q86TW2 530 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 HAPLN4Q86UW8 402 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 LYPD6Q86Y78 171 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 ZDHHC21Q8IVQ6 265 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 IFT20Q8IY31 132 aa5.3□□□□□ -1.56
MUC1-227ENST00000615517 ZNF676Q8N7Q3 588 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms