RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 DNTTIP1Q9H147 329 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 WDR13Q9H1Z4 485 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 RASSF4Q9H2L5 321 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 SMURF1Q9HCE7 757 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 SNTG1Q9NSN8 517 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 NLKQ9UBE8 527 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 POLDIP2Q9Y2S7 368 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 RPL36Q9Y3U8 105 aaKnown RBP11.13□□□□□ -0.63
SENP3-209ENST00000610454 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 LOC107986453A0A1B0GWG9 222 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 ANKRD61A6NGH8 418 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 A6NIN4 97 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 C22orf46C9J442 243 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.12□□□□□ -0.63
SENP3-209ENST00000610454 J3QLW9 94 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 J3QT63 122 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 TNFRSF13BO14836 293 aaPredicted RBP11.12□□□□□ -0.63
SENP3-209ENST00000610454 GPR37O15354 613 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 SLC16A6O15403 523 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 RHBDL1O75783 438 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 HTR1AP08908 422 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 ZNF19P17023 458 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 CCL1P22362 96 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 GABRA2P47869 451 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 IL13RA1P78552 427 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 CDONQ4KMG0 1287 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 TMEM244Q5VVB8 128 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 STUMQ69YW2 141 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 BTN2A1Q7KYR7 527 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 FAM216BQ8N7L0 139 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 OR5T2Q8NGG2 359 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 RHOXF1Q8NHV9 184 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 ZFAND2BQ8WV99 257 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 AQP3Q92482 292 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
SENP3-209ENST00000610454 LGALS12Q96DT0 336 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 AASSQ9UDR5 926 aa11.12□□□□□ -0.63
SENP3-209ENST00000610454 IGHV3OR16-10A0A075B7F0 116 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 ZNF879B4DU55 563 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 E9PQ18 207 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 TOX4O94842 621 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 VENTXO95231 258 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 OCM2P0CE71 109 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
SENP3-209ENST00000610454 ZNF20P17024 532 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 GABRB1P18505 474 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 OR12D2P58182 307 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 ISL1P61371 349 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 ACTG1P63261 375 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 RAB40BQ12829 278 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 KLHL22Q53GT1 634 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 KLF17Q5JT82 389 aaPredicted RBP11.11□□□□□ -0.63
SENP3-209ENST00000610454 TMEM42Q69YG0 159 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 CMTM4Q8IZR5 234 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 PRSS35Q8N3Z0 413 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 OR2G2Q8NGZ5 317 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 TRMT10AQ8TBZ6 339 aaKnown RBP11.11□□□□□ -0.63
SENP3-209ENST00000610454 NPRL2Q8WTW4 380 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 CYGBQ8WWM9 190 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 DACT3Q96B18 629 aaPredicted RBP11.11□□□□□ -0.63
SENP3-209ENST00000610454 C10orf35Q96D05 121 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 C4orf36Q96KX1 117 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 ALG8Q9BVK2 526 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 AMBNQ9NP70 447 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 INPP5EQ9NRR6 644 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 RASL12Q9NYN1 266 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 ZNF69Q9UC07 566 aa11.11□□□□□ -0.63
SENP3-209ENST00000610454 EXOGQ9Y2C4 368 aaKnown RBP11.11□□□□□ -0.63
SENP3-209ENST00000610454 J3QRE1 110 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 NXPH2O95156 264 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 IGHV4-38-2P0DP08 117 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 KIR3DL2P43630 455 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 CAPZA1P52907 286 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 GALEQ14376 348 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 CNN3Q15417 329 aaKnown RBP11.1□□□□□ -0.63
SENP3-209ENST00000610454 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
SENP3-209ENST00000610454 TTC23Q5W5X9 447 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 Q6ZSR3 168 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 LHFPL3Q86UP9 236 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 PACRGLQ8N7B6 248 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 ZNF676Q8N7Q3 588 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 SIGLECL1Q8N7X8 197 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 POC1AQ8NBT0 407 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 SETD9Q8NE22 299 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 PP6455Q8WZ26 134 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 WDFY2Q96P53 400 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 VCXQ9H320 206 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 ONECUT1Q9UBC0 465 aa11.1□□□□□ -0.63
SENP3-209ENST00000610454 SLC25A10Q9UBX3 287 aaPredicted RBP11.1□□□□□ -0.63
SENP3-209ENST00000610454 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
SENP3-209ENST00000610454 A0A1B0GW55 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 PQLC2LA1A4F0 135 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms