RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MAP1BP46821 2468 aaKnown RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 A0A1W2PPE2 198 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 BLACEA4D250 179 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 CFPP27918 469 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 GUCA1AP43080 201 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 SRSF4Q08170 494 aaKnown RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 FABP9Q0Z7S8 132 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 SMAD4Q13485 552 aaKnown RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 AWAT1Q58HT5 328 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 MFSD8Q8NHS3 518 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 RGCCQ9H4X1 137 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 RAB18Q9NP72 206 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 FSCN3Q9NQT6 498 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 A0A1B0GX78 115 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 TTLL8A6PVC2 850 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 PRSS44E7EML9 344 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 PCK2Q16822 640 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 NCMAPQ5T1S8 102 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 GGNBP1Q5YKI7 109 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 LYZL2Q7Z4W2 148 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 PEG10Q86TG7 708 aaKnown RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 OR11L1Q8NGX0 322 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 MRPL38Q96DV4 380 aaKnown RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 CACNA1EQ15878 2313 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 GPR37O15354 613 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 CHRM2P08172 466 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 NME1P15531 152 aaKnown RBP17.92■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF44P15621 663 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 NHLH2Q02577 135 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 IGSF11Q5DX21 431 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 TMEM100Q9NV29 134 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 ESPL1Q14674 2120 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 ZFHX4Q86UP3 3567 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 IGHV1OR21-1A0A087WYE8 117 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 COLCA2A8K830 154 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 IFNA2P01563 188 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 RAB5BP61020 215 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 EIF2S3LQ2VIR3 472 aaKnown RBP17.92■□□□□ 0.46
SSBP3-216ENST00000610401 POC1AQ8NBT0 407 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 UCN2Q96RP3 112 aa17.92■□□□□ 0.46
SSBP3-216ENST00000610401 A0A1W2PQD3 144 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 HSPB6O14558 160 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 FPR2P25090 351 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 PIGPP57054 158 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 PTX4Q96A99 478 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF285Q96NJ3 590 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 GNRHR2Q96P88 292 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 PECRQ9BY49 303 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 LIME1Q9H400 295 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 PLEK2Q9NYT0 353 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 SRPK3Q9UPE1 567 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 WIF1Q9Y5W5 379 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 C1orf196B1AJZ1 125 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 MFNGO00587 321 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 CAMLGP49069 296 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 LYZL4Q96KX0 146 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 CARHSP1Q9Y2V2 147 aaKnown RBP17.91■□□□□ 0.46
SSBP3-216ENST00000610401 C3orf80F5H4A9 247 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 HNF4GQ14541 408 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 ARRDC1Q8N5I2 433 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 LMAN1LQ9HAT1 526 aa17.91■□□□□ 0.46
SSBP3-216ENST00000610401 ANKUB1A6NFN9 424 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 S100A9P06702 114 aaKnown RBP17.9■□□□□ 0.46
SSBP3-216ENST00000610401 IGFBP4P22692 258 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 MTCP1P56278 107 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 FAHD2BQ6P2I3 314 aaPredicted RBP17.9■□□□□ 0.46
SSBP3-216ENST00000610401 PLXDC2Q6UX71 529 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 SGPP2Q8IWX5 399 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 NOXO1Q8NFA2 376 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 LILRB1Q8NHL6 650 aaPredicted RBP17.9■□□□□ 0.46
SSBP3-216ENST00000610401 FAHD2AQ96GK7 314 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 OR6C1Q96RD1 312 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 APOC1P02654 83 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 OR5AC1P0C628 307 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 APOBEC1P41238 236 aaKnown RBP17.9■□□□□ 0.46
SSBP3-216ENST00000610401 LBX1P52954 281 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 ABCA11PQ4W5N1 156 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 PDZD11Q5EBL8 140 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 AKR7LQ8NHP1 331 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 MAGT1Q9H0U3 335 aa17.9■□□□□ 0.46
SSBP3-216ENST00000610401 IGHV1OR15-9A0A0B4J2B8 117 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 GSTP1P09211 210 aaKnown RBP17.89■□□□□ 0.46
SSBP3-216ENST00000610401 PGA4P0DJD7 388 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 PGA3P0DJD8 388 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 TLE1Q04724 770 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 PHYHD1Q5SRE7 291 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 TMEM182Q6ZP80 229 aaPredicted RBP17.89■□□□□ 0.46
SSBP3-216ENST00000610401 Q7L0L9 218 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 P4HA3Q7Z4N8 544 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 OR9K2Q8NGE7 335 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 FAM213BQ8TBF2 198 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF385AQ96PM9 386 aaKnown RBP17.89■□□□□ 0.46
SSBP3-216ENST00000610401 MMP24Q9Y5R2 645 aa17.89■□□□□ 0.46
SSBP3-216ENST00000610401 EML6Q6ZMW3 1958 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 C7orf77A4D0Y5 90 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 F10P00742 488 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 B2MP61769 119 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 THEM4Q5T1C6 240 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 DEGS2Q6QHC5 323 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 POC1BQ8TC44 478 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms