RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 GABRA2P47869 451 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 CX3CR1P49238 355 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 NUDT2P50583 147 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 DYNLT3P51808 116 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 OR12D2P58182 307 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 RPL31P62899 125 aaKnown RBP5.11□□□□□ -1.59
CUX1-220ENST00000607092 GNG3P63215 75 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 MXRA7P84157 204 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 CD69Q07108 199 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 DBPQ10586 325 aaPredicted RBP5.11□□□□□ -1.59
CUX1-220ENST00000607092 PRDX4Q13162 271 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 KLRD1Q13241 179 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 EIF2B1Q14232 305 aaKnown RBP5.11□□□□□ -1.59
CUX1-220ENST00000607092 GK3PQ14409 553 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 SEC23BQ15437 767 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 DGUOKQ16854 277 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 SPATS1Q496A3 300 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 KLHL22Q53GT1 634 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 SLC35F1Q5T1Q4 408 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 GLYATQ6IB77 296 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 C16orf89Q6UX73 402 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 ZBTB49Q6ZSB9 765 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 RASSF6Q6ZTQ3 369 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 FAM57BQ71RH2 274 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 ZDHHC23Q8IYP9 409 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 ZNF561Q8N587 486 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 C11orf44Q8N8P7 122 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 OR2T33Q8NG76 320 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 PPP1R35Q8TAP8 253 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 FAM81AQ8TBF8 368 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 RNF133Q8WVZ7 376 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 OR5P3Q8WZ94 311 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 UTP4Q969X6 686 aaKnown RBP5.11□□□□□ -1.59
CUX1-220ENST00000607092 SGK3Q96BR1 496 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 PYURFQ96I23 114 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 RNF170Q96K19 258 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 WWC2-AS2Q96NR7 200 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 GAFA1Q96PS6 74 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 INTS14Q96SY0 518 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 NKX3-1Q99801 234 aaPredicted RBP5.11□□□□□ -1.59
CUX1-220ENST00000607092 FUZQ9BT04 418 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 MCRIP2Q9BUT9 160 aaKnown RBP5.11□□□□□ -1.59
CUX1-220ENST00000607092 IL20Q9NYY1 176 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 ABCD2Q9UBJ2 740 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 MAGEL2Q9UJ55 1249 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 FOXJ3Q9UPW0 622 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 TCF19Q9Y242 345 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 SIGLEC9Q9Y336 463 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 RHBDD3Q9Y3P4 386 aa5.11□□□□□ -1.59
CUX1-220ENST00000607092 DHRS12A0PJE2 317 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 TVP23AA6NH52 213 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 FAM90A8PA6NJQ4 464 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 ADARB2-AS1A8MUL3 147 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 NME4O00746 187 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 AKR7A2O43488 359 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 FKBP6O75344 327 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 CIB2O75838 187 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 MPIG6BO95866 241 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 PRB2P02812 416 aaPredicted RBP5.1□□□□□ -1.59
CUX1-220ENST00000607092 LYNP07948 512 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 SLC2A1P11166 492 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 SPI1P17947 270 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 PYCR1P32322 319 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 VDAC2P45880 294 aaPredicted RBP5.1□□□□□ -1.59
CUX1-220ENST00000607092 GP2P55259 537 aaKnown RBP5.1□□□□□ -1.59
CUX1-220ENST00000607092 CSNK2BP67870 215 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 GFOD2Q3B7J2 385 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 ZBTB37Q5TC79 503 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 MINOS1Q5TGZ0 78 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 FOXB2Q5VYV0 432 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 CRIP3Q6Q6R5 217 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 DEGS2Q6QHC5 323 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 THAP5Q7Z6K1 395 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 WDR86Q86TI4 376 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 ZNF573Q86YE8 665 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 OR51D1Q8NGF3 324 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 OR4X2Q8NGF9 303 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 OR5T2Q8NGG2 359 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 OR5A2Q8NGI9 324 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 OR6K6Q8NGW6 343 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 OR6N2Q8NGY6 317 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 DDOQ99489 341 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 TEX12Q9BXU0 123 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 WNT10AQ9GZT5 417 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 MMP28Q9H239 520 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 SERTAD4Q9NUC0 356 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 TBC1D23Q9NUY8 699 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 FRRS1LQ9P0K9 344 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 POLDIP2Q9Y2S7 368 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 PCDHGB5Q9Y5G0 923 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 TSSC4Q9Y5U2 329 aaPredicted RBP5.1□□□□□ -1.59
CUX1-220ENST00000607092 MINOS1-NBL1R4GNA1 71 aa5.1□□□□□ -1.59
CUX1-220ENST00000607092 A0A0U1RQV5 110 aa5.09□□□□□ -1.59
CUX1-220ENST00000607092 A0A1B0GW55 424 aa5.09□□□□□ -1.59
CUX1-220ENST00000607092 ZNF850A8MQ14 1090 aa5.09□□□□□ -1.59
CUX1-220ENST00000607092 M0QZK8 103 aa5.09□□□□□ -1.59
CUX1-220ENST00000607092 MTRF1O75570 445 aaKnown RBP5.09□□□□□ -1.59
CUX1-220ENST00000607092 FCN3O75636 299 aa5.09□□□□□ -1.59
CUX1-220ENST00000607092 GSTP1P09211 210 aaKnown RBP5.09□□□□□ -1.59
CUX1-220ENST00000607092 DUX4L2P0CJ85 424 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms