RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.03
CSMD1-217ENST00000602723 SIGIRRQ6IA17 410 aa8.65□□□□□ -1.03
CSMD1-217ENST00000602723 OR51B4Q9Y5P0 310 aa8.65□□□□□ -1.03
CSMD1-217ENST00000602723 H0YIG0 161 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 SPRY1O43609 319 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PPICP45877 212 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PRSS36Q5K4E3 855 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 WFDC5Q8TCV5 224 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 EDEM2Q9BV94 578 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ZNF646O15015 1829 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 TMEM30CPA0ZSE6 113 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ZNF737O75373 536 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 KRASP01116 189 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 C20orf141Q9NUB4 165 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PYCR3Q53H96 274 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 SPATA46Q5T0L3 261 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 BAHD1Q8TBE0 780 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 BCL2L10Q9HD36 194 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 TCRBV5S1A1TA0A578 114 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 MAP1LC3B2A6NCE7 125 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 SH2D7A6NKC9 451 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 M0QZ24 198 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 NOVP48745 357 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 FAM3AP98173 230 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 VWA2Q5GFL6 755 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 MAP1LC3BQ9GZQ8 125 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 TMEM272A0A1B0GTI8 110 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 H0Y8X5 98 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ADAM11O75078 769 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 SULT1A2P50226 295 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 SPCS3P61009 180 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ELFN2Q5R3F8 820 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 OR5C1Q8NGR4 320 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 GPR137Q96N19 417 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 IP6K3Q96PC2 410 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ZNF785A8K8V0 405 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ADAM20O43506 726 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 NAT1P18440 290 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 BSGP35613 385 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 CD200P41217 278 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 MEOX2P50222 304 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PPIAP62937 165 aaKnown RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ADPRHL1Q8NDY3 354 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PP6455Q8WZ26 134 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ALKBH3Q96Q83 286 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 MARCH5Q9NX47 278 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 LRP12Q9Y561 859 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PTPRDP23468 1912 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 M0R143 59 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PGA3P0DJD8 388 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 HTR1DP28221 377 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 Q8IYB0 196 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 APOBEC3DQ96AK3 386 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 GOSR1O95249 250 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 PJVKQ0ZLH3 352 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ELOBQ15370 118 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 TCTEX1D1Q8N7M0 179 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-217ENST00000602723 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
CSMD1-217ENST00000602723 FRG2CA6NGY1 282 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SLC22A20A6NK97 555 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 UPK1AO00322 258 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SLC17A2O00624 439 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 F11P03951 625 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 FDX2Q6P4F2 183 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 FBXL14Q8N1E6 418 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SLIRPQ9GZT3 109 aaKnown RBP8.63□□□□□ -1.03
CSMD1-217ENST00000602723 OR5AL1P0C617 328 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 ASCL1P50553 236 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SLC38A11Q08AI6 406 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 PTOV1Q86YD1 416 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 OR1F12Q8NHA8 337 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 NEIL1Q96FI4 390 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-217ENST00000602723 RAB40CQ96S21 281 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 UQCC1Q9NVA1 299 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 FUT3P21217 361 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SLC37A1P57057 533 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 TMEM147Q9BVK8 224 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 RPL29P47914 159 aaKnown RBP8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SLC26A10Q8NG04 563 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 TRMT61AQ96FX7 289 aaKnown RBP8.63□□□□□ -1.03
CSMD1-217ENST00000602723 FGF22Q9HCT0 170 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 OR1A1Q9P1Q5 309 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 HDGFL3Q9Y3E1 203 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 TMED3Q9Y3Q3 217 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 RBP4P02753 201 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 HLXQ14774 488 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-217ENST00000602723 OTPQ5XKR4 325 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 USP54Q70EL1 1684 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 OR2M3Q8NG83 312 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 C8orf44Q96CB5 159 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 ZBP1Q9H171 429 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 SEBOXQ9HB31 216 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-217ENST00000602723 FBXO4Q9UKT5 387 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 TRAPPC4Q9Y296 219 aa8.63□□□□□ -1.03
CSMD1-217ENST00000602723 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms