RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 NCR3LG1Q68D85 454 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 SLC35E4Q6ICL7 350 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 HAGHLQ6PII5 290 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 METAP1DQ6UB28 335 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 CCDC197Q8NCU1 140 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 C8orf46Q8TAG6 207 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 ZNF671Q8TAW3 534 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 OR51E1Q8TCB6 317 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 TNFRSF14Q92956 283 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 ZNF488Q96MN9 340 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 OR51I2Q9H344 312 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 METTL8Q9H825 291 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 IKZF2Q9UKS7 526 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 PIGLQ9Y2B2 252 aa14.38□□□□□ -0.11
SHKBP1-223ENST00000600552 IGKV1D-17A0A075B6S4 117 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 M0R1W7 72 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 FAHP16930 419 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 DCTDP32321 178 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 ESRRGP62508 458 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 CDK5Q00535 292 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 RIPPLY1Q0D2K3 151 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 SLC35D3Q5M8T2 416 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 KCTD18Q6PI47 426 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 C11orf44Q8N8P7 122 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 OR51G2Q8NGK0 314 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 OR5R1Q8NH85 324 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 SSX3Q99909 188 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 MROQ9BYG7 248 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 PBOV1Q9GZY1 135 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 C16orf95Q9H693 158 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 GPR84Q9NQS5 396 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 SF3B6Q9Y3B4 125 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 MAB21L2Q9Y586 359 aa14.37□□□□□ -0.11
SHKBP1-223ENST00000600552 ARRDC5A6NEK1 342 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 COX7A1P24310 79 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 GABRA5P31644 462 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 CEBPDP49716 269 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 CAV3P56539 151 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 CBX1P83916 185 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 GK3PQ14409 553 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 CEACAM21Q3KPI0 293 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 FAM76BQ5HYJ3 339 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 OR4M1Q8NGD0 313 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 DMRTB1Q96MA1 342 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 C19orf12Q9NSK7 152 aa14.36□□□□□ -0.11
SHKBP1-223ENST00000600552 A6NIN4 97 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 RFPL4AA6NLU0 287 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 RFPL4AL1F8VTS6 287 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 MAGEB4O15481 346 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 CSF1P09603 554 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 ANXA8P13928 327 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 MKXQ8IYA7 352 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 OR5A2Q8NGI9 324 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 OR5D13Q8NGL4 314 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 AQP3Q92482 292 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 TEAD3Q99594 435 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 YIPF3Q9GZM5 350 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 GPR173Q9NS66 373 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 FAM206AQ9NX38 181 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 OR14J1Q9UGF5 321 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 ENPP5Q9UJA9 477 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 COPS3Q9UNS2 423 aa14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 TET2Q6N021 2002 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-223ENST00000600552 AQP12BA6NM10 295 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 PRR32B1ATL7 298 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 SYNGR1O43759 233 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 TSPAN9O75954 239 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 NRASP01111 189 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 SLC2A5P22732 501 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 RIDAP52758 137 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 ERVFRD-1P60508 538 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 MFGE8Q08431 387 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 ACSM1Q08AH1 577 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 OCLNQ16625 522 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 C2orf68Q2NKX9 166 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 PLA1AQ53H76 456 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 ZNF684Q5T5D7 378 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 LCN1P1Q5VSP4 162 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 ACP7Q6ZNF0 438 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 Q6ZTK2 550 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 ASRGL1Q7L266 308 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 TRPM8Q7Z2W7 1104 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 BCDIN3DQ7Z5W3 292 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 AQP12AQ8IXF9 295 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 CD177Q8N6Q3 437 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 BEND2Q8NDZ0 799 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 OR2T27Q8NH04 317 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 PPP1R35Q8TAP8 253 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 NKX3-1Q99801 234 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 APOL4Q9BPW4 351 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 FAM234AQ9H0X4 552 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 C1orf21Q9H246 121 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 ZNF222Q9UK12 451 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 FOXJ3Q9UPW0 622 aa14.34□□□□□ -0.11
SHKBP1-223ENST00000600552 TRBV23-1A0A0A0MS06 115 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 A0A0U1RQV5 110 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 MEX3AA1L020 520 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 CCDC182A6NF36 153 aa14.33□□□□□ -0.12
SHKBP1-223ENST00000600552 ACOD1A6NK06 481 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms