RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 TEX29Q8N6K0 151 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 LRRC29Q8WV35 223 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 PP6455Q8WZ26 134 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 RPL3LQ92901 407 aaKnown RBP14.68□□□□□ -0.06
USHBP1-209ENST00000598570 SSBP3Q9BWW4 388 aaPredicted RBP14.68□□□□□ -0.06
USHBP1-209ENST00000598570 CHST5Q9GZS9 411 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 LPAR2Q9HBW0 351 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 RASL12Q9NYN1 266 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 CNOT2Q9NZN8 540 aaKnown RBP14.68□□□□□ -0.06
USHBP1-209ENST00000598570 ERVK-18Q9QC07 812 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 CAB39Q9Y376 341 aaPredicted RBP14.68□□□□□ -0.06
USHBP1-209ENST00000598570 A0A1B0GVI7 797 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 LOC107986453A0A1B0GWG9 222 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 A6NLC8 198 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 E9PI62 339 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 PITPNBP48739 271 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 ETV1P50549 477 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 ERVK11-1P61568 191 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 STUMQ69YW2 141 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 MOB3CQ70IA8 216 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 NLRC3Q7RTR2 1065 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 RDH10Q8IZV5 341 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 C8orf59Q8N0T1 100 aaPredicted RBP14.67□□□□□ -0.06
USHBP1-209ENST00000598570 DNAAF1Q8NEP3 725 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 OR8B3Q8NGG8 313 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 GGHQ92820 318 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 OR8B2Q96RD0 313 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 PSORS1C1Q9UIG5 152 aa14.67□□□□□ -0.06
USHBP1-209ENST00000598570 ANKRD61A6NGH8 418 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 OGG1O15527 345 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 RHBDL1O75783 438 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 ZFPL1O95159 310 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 MT-ND2P03891 347 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 HTR1AP08908 422 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 RPS2P15880 293 aaKnown RBP14.66□□□□□ -0.06
USHBP1-209ENST00000598570 SRD5A1P18405 259 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 CD80P33681 288 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 MICBQ29980 383 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 CEP78Q5JTW2 689 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 DCAF12L2Q5VW00 463 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 RNLSQ5VYX0 342 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 SFRP4Q6FHJ7 346 aaPredicted RBP14.66□□□□□ -0.06
USHBP1-209ENST00000598570 C1QL2Q7Z5L3 287 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 COMMD2Q86X83 199 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF573Q86YE8 665 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 C19orf18Q8NEA5 215 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 ANGPTL6Q8NI99 470 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF671Q8TAW3 534 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 RAB40AQ8WXH6 277 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 PKIBQ9C010 78 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 VCXQ9H320 206 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 SEBOXQ9HB31 216 aaPredicted RBP14.66□□□□□ -0.06
USHBP1-209ENST00000598570 HES4Q9HCC6 221 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 GTF2A1LQ9UNN4 478 aa14.66□□□□□ -0.06
USHBP1-209ENST00000598570 IGHV2-70DA0A0C4DH43 119 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 IGKV1-9A0A0C4DH69 117 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 ERICH4A6NGS2 130 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 C3orf80F5H4A9 247 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 PHF1O43189 567 aaPredicted RBP14.65□□□□□ -0.06
USHBP1-209ENST00000598570 PGA5P0DJD9 388 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 PLCXD3Q63HM9 321 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF529Q6P280 563 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 FAHD2BQ6P2I3 314 aaPredicted RBP14.65□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF788Q6ZQV5 615 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 POC1AQ8NBT0 407 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 OR52N1Q8NH53 320 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 ADAT3Q96EY9 351 aaPredicted RBP14.65□□□□□ -0.06
USHBP1-209ENST00000598570 FAHD2AQ96GK7 314 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 TMEM80Q96HE8 168 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 NRIP2Q9BQI9 281 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 WDR13Q9H1Z4 485 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 CLN8Q9UBY8 286 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF222Q9UK12 451 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 HHLA2Q9UM44 414 aa14.65□□□□□ -0.06
USHBP1-209ENST00000598570 IGKV1-27A0A075B6S5 117 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 hCG_1807616A0A1W2PRN6 198 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 EFCAB10A6NFE3 127 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 TMEM212A6NML5 194 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 J3QT63 122 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 GPR37O15354 613 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 IFNA2P01563 188 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 FUT6P51993 359 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 GBX2P52951 348 aaPredicted RBP14.64□□□□□ -0.07
USHBP1-209ENST00000598570 GNB2P62879 340 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 IL24Q13007 206 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 RPL22L1Q6P5R6 122 aaKnown RBP14.64□□□□□ -0.07
USHBP1-209ENST00000598570 CRIP3Q6Q6R5 217 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 PARP16Q8N5Y8 322 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 LY6G5BQ8NDX9 201 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 OR10AC1Q8NH08 325 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 SEH1LQ96EE3 360 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 C7orf69Q9H7B7 122 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 SMURF1Q9HCE7 757 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 GPR173Q9NS66 373 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 BABAM2Q9NXR7 383 aa14.64□□□□□ -0.07
USHBP1-209ENST00000598570 EXOSC1Q9Y3B2 195 aaKnown RBP14.64□□□□□ -0.07
USHBP1-209ENST00000598570 A6NIN4 97 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 C22orf46C9J442 243 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 GATBO75879 557 aaKnown RBP14.63□□□□□ -0.07
USHBP1-209ENST00000598570 ECDO95905 644 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms