RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 LHX4Q969G2 390 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 UBE2FQ969M7 185 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 OR8B4Q96RC9 309 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 YIPF3Q9GZM5 350 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 OR51I2Q9H344 312 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 ADGRL4Q9HBW9 690 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 HAO2Q9NYQ3 351 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 C1RLQ9NZP8 487 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 DNAJB11Q9UBS4 358 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 MRM2Q9UI43 246 aaKnown RBP8.61□□□□□ -1.03
LIG1-213ENST00000596672 GMPPBQ9Y5P6 360 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 A6NIN4 97 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 P2RY10O00398 339 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 SPRY1O43609 319 aaPredicted RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 NDUFA2O43678 99 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 IGHV4-59P01825 116 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 MUC1P15941 1255 aaPredicted RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 FAHP16930 419 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 PAICSP22234 425 aaKnown RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 PAX6P26367 422 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 MTNR1AP48039 350 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 GPM6AP51674 278 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 ERVFRD-1P60508 538 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 FOXL1Q12952 345 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 IKZF1Q13422 519 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 CEP78Q5JTW2 689 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 ZNF684Q5T5D7 378 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 ZNF691Q5VV52 312 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 RBMS3Q6XE24 437 aaKnown RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 VMO1Q7Z5L0 202 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 THAP5Q7Z6K1 395 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 C8orf59Q8N0T1 100 aaPredicted RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 C11orf42Q8N5U0 333 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 TCEANCQ8N8B7 351 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 CSNK2A3Q8NEV1 391 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 TMIGD2Q96BF3 282 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 RNF170Q96K19 258 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 TSC22D3Q99576 134 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 DCTN5Q9BTE1 182 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 GABARAPL3Q9BY60 117 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 PBOV1Q9GZY1 135 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 RGCCQ9H4X1 137 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 CNTD2Q9H8S5 307 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 GPR84Q9NQS5 396 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 SIRT7Q9NRC8 400 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 NDUFA13Q9P0J0 144 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 AASSQ9UDR5 926 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 NOP16Q9Y3C1 178 aaKnown RBP8.6□□□□□ -1.03
LIG1-213ENST00000596672 MPC1Q9Y5U8 109 aa8.6□□□□□ -1.03
LIG1-213ENST00000596672 A0A0U1RQV5 110 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 TMEM269A0A1B0GVZ9 245 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 A0A1W2PRD5 423 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 A0A1W2PRF3 423 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 A0A1W2PRM7 423 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 DPPA5A6NC42 116 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 ZNF732B4DXR9 585 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 E9PQ18 207 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 SYNGR1O43759 233 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 APOL3O95236 402 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 PSG2P11465 335 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 RPS7P62081 194 aaKnown RBP8.59□□□□□ -1.03
LIG1-213ENST00000596672 IL5RAQ01344 420 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 MICBQ29980 383 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 CDONQ4KMG0 1287 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 PRR31Q5SQ13 230 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 GPR157Q5UAW9 335 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 CD276Q5ZPR3 534 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 FIP1L1Q6UN15 594 aaKnown RBP8.59□□□□□ -1.03
LIG1-213ENST00000596672 MEPCEQ7L2J0 689 aaKnown RBP8.59□□□□□ -1.03
LIG1-213ENST00000596672 KRT77Q7Z794 578 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.59□□□□□ -1.03
LIG1-213ENST00000596672 BATF2Q8N1L9 274 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 CD177Q8N6Q3 437 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 KIR3DL3Q8N743 410 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 OR10Z1Q8NGY1 313 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 C8orf46Q8TAG6 207 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 AQP3Q92482 292 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 SLC25A28Q96A46 364 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 FAM71F1Q96KD3 344 aaPredicted RBP8.59□□□□□ -1.03
LIG1-213ENST00000596672 IL4I1Q96RQ9 567 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 MICU1Q9BPX6 476 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 NIPAL2Q9H841 368 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 ZNF391Q9UJN7 358 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 LAMP5Q9UJQ1 280 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 SLC22A13Q9Y226 551 aa8.59□□□□□ -1.03
LIG1-213ENST00000596672 F8VVB4 439 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 F8VWA3 439 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 H3BSH0 61 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 SIGLEC5O15389 551 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 APOC1P02654 83 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 LIPFP07098 398 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 ACAA1P09110 424 aaPredicted RBP8.58□□□□□ -1.04
LIG1-213ENST00000596672 CFL1P23528 166 aaKnown RBP8.58□□□□□ -1.04
LIG1-213ENST00000596672 IER3P46695 156 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 CEBPDP49716 269 aaPredicted RBP8.58□□□□□ -1.04
LIG1-213ENST00000596672 ISL1P61371 349 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 ESRRGP62508 458 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 IL18R1Q13478 541 aa8.58□□□□□ -1.04
LIG1-213ENST00000596672 TAF9Q16594 264 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms