RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 HES5Q5TA89 166 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 BCL2L15Q5TBC7 163 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 CARD17Q5XLA6 110 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 CORO6Q6QEF8 472 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 C1orf229Q6ZS94 237 aaPredicted RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 SPATC1Q76KD6 591 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 RDH10Q8IZV5 341 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ZCCHC24Q8N2G6 241 aaKnown RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 OR6N1Q8NGY5 312 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ZNF671Q8TAW3 534 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 NEU4Q8WWR8 484 aaPredicted RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 APH1AQ96BI3 265 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ITPKCQ96DU7 683 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 SLC6A7Q99884 636 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 PLK3Q9H4B4 646 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 UNKLQ9H9P5 680 aaKnown RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 LIN7BQ9HAP6 207 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 RHBDL2Q9NX52 303 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 OR5V1Q9UGF6 321 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 STEAP1Q9UHE8 339 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 LOC105371242A0A075B767 164 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 A0A0B4J203 849 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 MEGF11A6BM72 1044 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 SLC17A2O00624 439 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 SULT1B1O43704 296 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 ITGA5P08648 1049 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 OR4A8P0C604 315 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 ACSM4P0C7M7 580 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 CCL1P22362 96 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 CDAP32320 146 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 SELENOPP49908 381 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 ZNF84P51523 738 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 UBA52P62987 128 aaKnown RBP10.92□□□□□ -0.66
SCAF1-202ENST00000595242 GRB2P62993 217 aaKnown RBP10.92□□□□□ -0.66
SCAF1-202ENST00000595242 EFNB3Q15768 340 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 ADIPOQQ15848 244 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 LYPD6Q86Y78 171 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 CMTM4Q8IZR5 234 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 C19orf18Q8NEA5 215 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 DUSP18Q8NEJ0 188 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 UBASH3BQ8TF42 649 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 PPP1R14AQ96A00 147 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 RFT1Q96AA3 541 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 HAVCR1Q96D42 359 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 ABHD1Q96SE0 405 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 PBOV1Q9GZY1 135 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 SEC61A2Q9H9S3 476 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 PLEKHA1Q9HB21 404 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 SLC17A5Q9NRA2 495 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 CENPMQ9NSP4 180 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 RBFOX1Q9NWB1 397 aaKnown RBP10.92□□□□□ -0.66
SCAF1-202ENST00000595242 ASH2LQ9UBL3 628 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 AMDHD2Q9Y303 409 aa10.92□□□□□ -0.66
SCAF1-202ENST00000595242 NOSIPQ9Y314 301 aaKnown RBP10.92□□□□□ -0.66
SCAF1-202ENST00000595242 LYNX1G3V0Z9 82 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 LYRM1O43325 122 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 AVPP01185 164 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 IGLV3-1P01715 115 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 LYNX1P0DP58 116 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
SCAF1-202ENST00000595242 NTF4P34130 210 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 MRPS10P82664 201 aaKnown RBP10.91□□□□□ -0.66
SCAF1-202ENST00000595242 FAM27BQ5VT28 67 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 C9orf135Q5VTT2 229 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 MZT2BQ6NZ67 158 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 ZNF529Q6P280 563 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 VHLLQ6RSH7 139 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 Q6ZSR3 168 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 GPR137CQ8N3F9 429 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 BPIFB2Q8N4F0 458 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 TEX29Q8N6K0 151 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 CELF2-AS1Q8N7Q2 184 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 NKAIN3Q8N8D7 197 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 DRAXINQ8NBI3 349 aaPredicted RBP10.91□□□□□ -0.66
SCAF1-202ENST00000595242 C15orf40Q8WUR7 153 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 SMIM4Q8WVI0 70 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 YIPF5Q969M3 257 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 NEDD4LQ96PU5 975 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 C7orf50Q9BRJ6 194 aaKnown RBP10.91□□□□□ -0.66
SCAF1-202ENST00000595242 THAP7Q9BT49 309 aaPredicted RBP10.91□□□□□ -0.66
SCAF1-202ENST00000595242 ZNF416Q9BWM5 594 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 ULBP2Q9BZM5 246 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 EMC3Q9P0I2 261 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 CKLFQ9UBR5 152 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 GTF2A1LQ9UNN4 478 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 PPIAL4AQ9Y536 164 aa10.91□□□□□ -0.66
SCAF1-202ENST00000595242 A0A1B0GTI1 187 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 MAS1P04201 325 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 HSD11B1P28845 292 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 CAPZA1P52907 286 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 ODF4Q2M2E3 257 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 NRN1LQ496H8 165 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 C1orf100Q5SVJ3 147 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 GLT8D1Q68CQ7 371 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 PRSS45Q7RTY3 260 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 C17orf78Q8N4C9 275 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 GJC3Q8NFK1 279 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms