RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MEGF9Q9H1U4 602 aa8.65□□□□□ -1.02
USE1-203ENST00000593597 YY1AP1Q9H869 796 aa8.65□□□□□ -1.02
USE1-203ENST00000593597 REEP1Q9H902 201 aa8.65□□□□□ -1.02
USE1-203ENST00000593597 COPS3Q9UNS2 423 aa8.65□□□□□ -1.02
USE1-203ENST00000593597 CAB39Q9Y376 341 aaPredicted RBP8.65□□□□□ -1.02
USE1-203ENST00000593597 BTBD17A6NE02 478 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ARRDC5A6NEK1 342 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ANKRD61A6NGH8 418 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ADARB2-AS1A8MUL3 147 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 H3BN98 237 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 SYNGR1O43759 233 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ANGPTL7O43827 346 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 SRSF10O75494 262 aaKnown RBP8.64□□□□□ -1.03
USE1-203ENST00000593597 PAHP00439 452 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 OPN1MWP04001 364 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 OPN1MW2P0DN77 364 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 OPN1MW3P0DN78 364 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 T-ENOLP0DO92 83 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 CCL3L1P16619 93 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 FAHP16930 419 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 KIR2DS4P43632 304 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 GABRA2P47869 451 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 DLX6P56179 175 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 CDK5Q00535 292 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 TRIM25Q14258 630 aaKnown RBP8.64□□□□□ -1.03
USE1-203ENST00000593597 GINS1Q14691 196 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 CEACAM21Q3KPI0 293 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 TMEM236Q5W0B7 351 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 NCR3LG1Q68D85 454 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ACP7Q6ZNF0 438 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 CPOQ8IVL8 374 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 FAM185AQ8N0U4 392 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 BATF2Q8N1L9 274 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 TMEM185AQ8NFB2 350 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 GIPC3Q8TF64 312 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 WIPF2Q8TF74 440 aaPredicted RBP8.64□□□□□ -1.03
USE1-203ENST00000593597 TEAD3Q99594 435 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 TTTY10Q9BZA0 68 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 NIPAL2Q9H841 368 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ZNF702PQ9H963 129 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 ARL2BPQ9Y2Y0 163 aa8.64□□□□□ -1.03
USE1-203ENST00000593597 TRBV23-1A0A0A0MS06 115 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 A0A0U1RQV5 110 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 RFPL4AA6NLU0 287 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 B2RBV5 119 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 PRR23D1E9PI22 279 aaPredicted RBP8.63□□□□□ -1.03
USE1-203ENST00000593597 RFPL4AL1F8VTS6 287 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 MRPL3P09001 348 aaKnown RBP8.63□□□□□ -1.03
USE1-203ENST00000593597 PRR23D2P0DMB1 279 aaPredicted RBP8.63□□□□□ -1.03
USE1-203ENST00000593597 JUNBP17275 347 aaPredicted RBP8.63□□□□□ -1.03
USE1-203ENST00000593597 POU1F1P28069 291 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 GNGT1P63211 74 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 GNG3P63215 75 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 LRRC75BQ2VPJ9 315 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 TMEM200BQ69YZ2 307 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 HAGHLQ6PII5 290 aaPredicted RBP8.63□□□□□ -1.03
USE1-203ENST00000593597 TCF23Q7RTU1 214 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 DHFR2Q86XF0 187 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 FTMTQ8N4E7 242 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 ZNF454Q8N9F8 522 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 POC1AQ8NBT0 407 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 OR5K1Q8NHB7 308 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 OR51E1Q8TCB6 317 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 ABCB9Q9NP78 766 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 GPR84Q9NQS5 396 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 SERTAD4Q9NUC0 356 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 NDE1Q9NXR1 346 aa8.63□□□□□ -1.03
USE1-203ENST00000593597 MEX3AA1L020 520 aaKnown RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 FAM90A8PA6NJQ4 464 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 H0YAE9 185 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 M0R129 80 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 MAGEB4O15481 346 aaPredicted RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 PRODHO43272 600 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 TTRP02766 147 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 PGA5P0DJD9 388 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 RAP2AP10114 183 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 PRKACGP22612 351 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 COX7A1P24310 79 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 SNCBQ16143 134 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 FAM98BQ52LJ0 330 aaKnown RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 ZNF782Q6ZMW2 699 aaPredicted RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 Q6ZS46 218 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 MOB3CQ70IA8 216 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 THAP5Q7Z6K1 395 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 OR4M1Q8NGD0 313 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 OR51G2Q8NGK0 314 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 OR8B4Q96RC9 309 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 NRIP2Q9BQI9 281 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 CHID1Q9BWS9 393 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 PBOV1Q9GZY1 135 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 MUC13Q9H3R2 512 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 RANBP3Q9H6Z4 567 aaPredicted RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 SLC25A19Q9HC21 320 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 HES4Q9HCC6 221 aa8.62□□□□□ -1.03
USE1-203ENST00000593597 SF3B6Q9Y3B4 125 aaKnown RBP8.62□□□□□ -1.03
USE1-203ENST00000593597 A0A1B0GTI1 187 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms