RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ESCO2Q56NI9 601 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 LHFPL2Q6ZUX7 228 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 PEG10Q86TG7 708 aaKnown RBP13.68□□□□□ -0.22
MBD1-227ENST00000592060 TUSC5Q8IXB3 177 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
MBD1-227ENST00000592060 OR13G1Q8NGZ3 307 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 SPSB4Q96A44 273 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 CPNE2Q96FN4 548 aaPredicted RBP13.68□□□□□ -0.22
MBD1-227ENST00000592060 C1QTNF5Q9BXJ0 243 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 METTL9Q9H1A3 318 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 RNF122Q9H9V4 155 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 BCO1Q9HAY6 547 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 GPR132Q9UNW8 380 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 MUC6Q6W4X9 2439 aa13.68□□□□□ -0.22
MBD1-227ENST00000592060 FAM230AA0A1W2PPH8 454 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 TUBAL3A6NHL2 446 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 FIGNL2A6NMB9 653 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 DUS4LO95620 317 aaKnown RBP13.67□□□□□ -0.22
MBD1-227ENST00000592060 TMEM225BP0DP42 221 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 SNU13P55769 128 aaKnown RBP13.67□□□□□ -0.22
MBD1-227ENST00000592060 TAS2R46P59540 309 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 NHLRC3Q5JS37 347 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 LIN54Q6MZP7 749 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 COLCA1Q6ZS62 124 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 FNDC9Q8TBE3 224 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 TMEM230Q96A57 120 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 PHB2Q99623 299 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 PRDM14Q9GZV8 571 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 PARPBPQ9NWS1 579 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
MBD1-227ENST00000592060 OSGIN2Q9Y236 505 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 DBX1A6NMT0 343 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 ZNF724A8MTY0 619 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 ZNF587BE7ETH6 402 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 MSTNO14793 375 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 XRCC2O43543 280 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 SPRY1O43609 319 aaPredicted RBP13.67□□□□□ -0.22
MBD1-227ENST00000592060 ANGPTL7O43827 346 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 RP2O75695 350 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 B3GALNT1O75752 331 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 NRASP01111 189 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 ZNF24P17028 368 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 AKR1C4P17516 323 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 FPR2P25090 351 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 SPEM2Q0P670 501 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 SIGIRRQ6IA17 410 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 RTL6Q6ICC9 239 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 TMEM185AQ8NFB2 350 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
MBD1-227ENST00000592060 ST6GALNAC5Q9BVH7 336 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 ARL6Q9H0F7 186 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 C5orf66Q9H5L9 145 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 CALHM2Q9HA72 323 aa13.67□□□□□ -0.22
MBD1-227ENST00000592060 ARHGAP21Q5T5U3 1957 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 OR5H14A6NHG9 310 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 GABRR1P24046 479 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 RBP2P50120 134 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 NPY4RP50391 375 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 FOXG1P55316 489 aaPredicted RBP13.66□□□□□ -0.22
MBD1-227ENST00000592060 FGL1Q08830 312 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 ATP1A1-AS1Q5TC04 95 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 AADACL3Q5VUY0 350 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 TMEM65Q6PI78 240 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 C6orf201Q7Z4U5 140 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 PIP4P1Q86T03 277 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 IL22RA1Q8N6P7 574 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 CSNK2A3Q8NEV1 391 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 MAFIPQ8WZ33 124 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 EMG1Q92979 244 aaKnown RBP13.66□□□□□ -0.22
MBD1-227ENST00000592060 BORCS8Q96FH0 119 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 GSX2Q9BZM3 304 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
MBD1-227ENST00000592060 FREM2Q5SZK8 3169 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 FREM1Q5H8C1 2179 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 HTR3BO95264 441 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 SLC25A4P12235 298 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 VAMP1P23763 118 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 RSU1Q15404 277 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 TRIP6Q15654 476 aaKnown RBP13.65□□□□□ -0.22
MBD1-227ENST00000592060 CASTOR1Q8WTX7 329 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 MFFQ9GZY8 342 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 IGKV1D-8A0A087WSZ0 117 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 IGKV1-12A0A0C4DH73 117 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 ZNF816-ZNF321PA0A0X1KG74 233 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 IGKV1D-12P01611 117 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 MPGP29372 298 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 AGTR1P30556 359 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 PPIAP62937 165 aaKnown RBP13.65□□□□□ -0.22
MBD1-227ENST00000592060 CAMK2BQ13554 666 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 C3AR1Q16581 482 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 TMEM128Q5BJH2 165 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 NSUN5P2Q63ZY6 315 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 THOC7Q6I9Y2 204 aaKnown RBP13.65□□□□□ -0.22
MBD1-227ENST00000592060 GSG1LQ6UXU4 331 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 OVCH2Q7RTZ1 564 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 GLRX5Q86SX6 157 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 ZFP62Q8NB50 900 aaPredicted RBP13.65□□□□□ -0.22
MBD1-227ENST00000592060 SUMF1Q8NBK3 374 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 OR5AP2Q8NGF4 316 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms