RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 C20orf24Q9BUV8 137 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 MMP27Q9H306 513 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 MRPL15Q9P015 296 aaKnown RBP10.03□□□□□ -0.8
SEH1L-208ENST00000590843 FLVCR1Q9Y5Y0 555 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 GABRA4P48169 554 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 CCR9P51686 369 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 MARS2Q96GW9 593 aaKnown RBP10.03□□□□□ -0.8
SEH1L-208ENST00000590843 PIPOXQ9P0Z9 390 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 ASB1Q9Y576 335 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 A0A1W2PS18 150 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 FAM157AC9JC47 383 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 TOX4O94842 621 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 MYF6P23409 242 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 MC5RP33032 325 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 NPBWR1P48145 328 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 AQP4P55087 323 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 ZP4Q12836 540 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 ANKRD13BQ86YJ7 626 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 LGI3Q8N145 548 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 NFAM1Q8NET5 270 aaPredicted RBP10.03□□□□□ -0.8
SEH1L-208ENST00000590843 OR2V2Q96R30 315 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 BEX1Q9HBH7 125 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 TREM2Q9NZC2 230 aa10.03□□□□□ -0.8
SEH1L-208ENST00000590843 A0A0A6YYH2 397 aa10.02□□□□□ -0.8
SEH1L-208ENST00000590843 A6NJ64 397 aa10.02□□□□□ -0.8
SEH1L-208ENST00000590843 GP2P55259 537 aaKnown RBP10.02□□□□□ -0.8
SEH1L-208ENST00000590843 TAS2R45P59539 299 aa10.02□□□□□ -0.8
SEH1L-208ENST00000590843 KCTD21Q4G0X4 260 aa10.02□□□□□ -0.8
SEH1L-208ENST00000590843 METAP1DQ6UB28 335 aaPredicted RBP10.02□□□□□ -0.8
SEH1L-208ENST00000590843 OTOSQ8NHW6 89 aa10.02□□□□□ -0.8
SEH1L-208ENST00000590843 UCN2Q96RP3 112 aa10.02□□□□□ -0.8
SEH1L-208ENST00000590843 TMEFF2Q9UIK5 374 aaPredicted RBP10.02□□□□□ -0.8
SEH1L-208ENST00000590843 CDRT15L2A8MXV6 281 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 PTH2RP49190 550 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 MRPS11P82912 194 aaKnown RBP10.02□□□□□ -0.81
SEH1L-208ENST00000590843 DOC2BQ14184 412 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 UBE2NLQ5JXB2 153 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 GLYATL3Q5SZD4 288 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 ATG4DQ86TL0 474 aaPredicted RBP10.02□□□□□ -0.81
SEH1L-208ENST00000590843 OR4F5Q8NH21 305 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 SCN1AP35498 2009 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 ZNF708P17019 499 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 TMEM11P17152 192 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 SSX1Q16384 188 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 CMPK2Q5EBM0 449 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 GCSAMQ8N6F7 178 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 SLC25A19Q9HC21 320 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 SLC7A10Q9NS82 523 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 ATPIF1Q9UII2 106 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 WIPI2Q9Y4P8 454 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 BRCA1P38398 1863 aaKnown RBP10.02□□□□□ -0.81
SEH1L-208ENST00000590843 MYO18AQ92614 2054 aaKnown RBP10.02□□□□□ -0.81
SEH1L-208ENST00000590843 OOEPA6NGQ2 149 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 LANCL1O43813 399 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 PSMB1P20618 241 aaKnown RBP10.02□□□□□ -0.81
SEH1L-208ENST00000590843 FAM27BQ5VT28 67 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 STEAP1BQ6NZ63 245 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 OLIG3Q7RTU3 272 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 CHIAQ9BZP6 476 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 ZNF385DQ9H6B1 395 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 UNC13CQ8NB66 2214 aa10.02□□□□□ -0.81
SEH1L-208ENST00000590843 FGF2P09038 288 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 ITLN1Q8WWA0 313 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 GHSRQ92847 366 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 FAM3DQ96BQ1 224 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 OR8B4Q96RC9 309 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 BCL7BQ9BQE9 202 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 PSME4Q14997 1843 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 MS4A18H0YCH9 400 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 HPGDSO60760 199 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 PTP4A3O75365 173 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 DHODHQ02127 395 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 SNTB1Q13884 538 aaKnown RBP10.01□□□□□ -0.81
SEH1L-208ENST00000590843 MS4A18Q3C1V0 323 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 DIMT1Q9UNQ2 313 aaKnown RBP10.01□□□□□ -0.81
SEH1L-208ENST00000590843 MGST3O14880 152 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 CBFA2T3O75081 653 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 HAND1O96004 215 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 GLI4P10075 376 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 IGLV3-21P80748 117 aaPredicted RBP10.01□□□□□ -0.81
SEH1L-208ENST00000590843 TNK1Q13470 666 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 LSMEM1Q8N8F7 131 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 OR8G5Q8NG78 346 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 SLC29A1Q99808 456 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.01□□□□□ -0.81
SEH1L-208ENST00000590843 PRSS50Q9UI38 385 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 CAPNS1P04632 268 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 UMODP07911 640 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 CDKN1AP38936 164 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 MMDQ15546 238 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 CBLN3Q6UW01 205 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 C6orf89Q6UWU4 347 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 SDSLQ96GA7 329 aa10.01□□□□□ -0.81
SEH1L-208ENST00000590843 OR2J1Q9GZK6 312 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms