RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ZNF573Q86YE8 665 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 FBXL14Q8N1E6 418 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 ZNF611Q8N823 705 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.21
SS18-226ENST00000585241 ZSCAN4Q8NAM6 433 aaPredicted RBP13.71□□□□□ -0.21
SS18-226ENST00000585241 PXT1Q8NFP0 134 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 OR10AD1Q8NGE0 317 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 PKIBQ9C010 78 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 LIN7BQ9HAP6 207 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 C14orf119Q9NWQ9 140 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 GHRLQ9UBU3 117 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 FBLN5Q9UBX5 448 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 FBXO9Q9UK97 447 aaPredicted RBP13.71□□□□□ -0.21
SS18-226ENST00000585241 USP9YO00507 2555 aaPredicted RBP13.71□□□□□ -0.22
SS18-226ENST00000585241 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.22
SS18-226ENST00000585241 LOC100289279A0A1B0GTE1 492 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 C17orf100A8MU93 164 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 F5H5P2 479 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 LDLRAD4O15165 306 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 CLPXO76031 633 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 IGHV1-46P01743 117 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 DANCRP0C864 163 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 UBBP0CG47 229 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 COX6B1P14854 86 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 PTGFRP43088 359 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 ZNF154Q13106 437 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 PDZK1IP1Q13113 114 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 C11orf71Q6IPW1 123 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 CALHM1Q8IU99 346 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 SAXO1Q8IYX7 474 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 TBC1D15Q8TC07 691 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 FAM3DQ96BQ1 224 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 ELMOD3Q96FG2 381 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 GPER1Q99527 375 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 NKX3-1Q99801 234 aaPredicted RBP13.7□□□□□ -0.22
SS18-226ENST00000585241 SMURF1Q9HCE7 757 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 NKIRAS2Q9NYR9 191 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 SPATA2Q9UM82 520 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
SS18-226ENST00000585241 ETV7Q9Y603 341 aa13.7□□□□□ -0.22
SS18-226ENST00000585241 J3QT63 122 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 BPNT1O95861 308 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 GATA4P43694 442 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 HAAOP46952 286 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 PPOXP50336 477 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 CLDN12P56749 244 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 QRFPP83859 136 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 IL24Q13007 206 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 FAM209AQ5JX71 171 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 AGAP6Q5VW22 663 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 TMEM200AQ86VY9 491 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 ANGPTL5Q86XS5 388 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 OR2Z1Q8NG97 314 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 TNFAIP8L1Q8WVP5 186 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 RFT1Q96AA3 541 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 MEGF10Q96KG7 1140 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 CMTM3Q96MX0 182 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 PSMG3-AS1Q96PY0 264 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 IL36GQ9NZH8 169 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 OR5V1Q9UGF6 321 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 IL19Q9UHD0 177 aa13.69□□□□□ -0.22
SS18-226ENST00000585241 A0A0B4J203 849 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 SPRY3O43610 288 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 PAHP00439 452 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 CD8AP01732 235 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 ACAA1P09110 424 aaPredicted RBP13.68□□□□□ -0.22
SS18-226ENST00000585241 SNRPBP14678 240 aaKnown RBP13.68□□□□□ -0.22
SS18-226ENST00000585241 TNFSF4P23510 183 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 POU3F4P49335 361 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 SRP9P49458 86 aaKnown RBP13.68□□□□□ -0.22
SS18-226ENST00000585241 SNRPD2P62316 118 aaKnown RBP13.68□□□□□ -0.22
SS18-226ENST00000585241 P2RY14Q15391 338 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 AWAT2Q6E213 333 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 MZT2AQ6P582 158 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 GLIPR1L1Q6UWM5 242 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 OR2W3Q7Z3T1 314 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 C1QL2Q7Z5L3 287 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 C11orf53Q8IXP5 236 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 Q8NFD4 153 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 OR51D1Q8NGF3 324 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 OR5D18Q8NGL1 313 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 OR5H6Q8NGV6 325 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 ZNF671Q8TAW3 534 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 LGALS14Q8TCE9 139 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 AQP3Q92482 292 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 PTX4Q96A99 478 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 C14orf79Q96F83 325 aa13.68□□□□□ -0.22
SS18-226ENST00000585241 TRAF4Q9BUZ4 470 aaPredicted RBP13.68□□□□□ -0.22
SS18-226ENST00000585241 IGKV1-12A0A0C4DH73 117 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 TMEM14DPA8MWL7 114 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 IGKV1D-12P01611 117 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 SOD3P08294 240 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 ARSBP15848 533 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 CFHR2P36980 270 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 BMXP51813 675 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms