RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TMIGD2Q96BF3 282 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 SEH1LQ96EE3 360 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 DMRTB1Q96MA1 342 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 ZNF48Q96MX3 618 aaPredicted RBP10.25□□□□□ -0.77
SS18-225ENST00000585121 DUX5Q96PT3 197 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 C9orf16Q9BUW7 83 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 ADI1Q9BV57 179 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 WDR13Q9H1Z4 485 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 SNTG1Q9NSN8 517 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 ONECUT1Q9UBC0 465 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 NLKQ9UBE8 527 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
SS18-225ENST00000585121 KPTNQ9Y664 436 aa10.25□□□□□ -0.77
SS18-225ENST00000585121 A0A1B0GVI7 797 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 A0A1W2PQL4 384 aaPredicted RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 SNTNA6NMZ2 147 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 CLDN34H7C241 214 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 MAGEB4O15481 346 aaPredicted RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 SRSF10O75494 262 aaKnown RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 SULT1C4O75897 302 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 SFTPBP07988 381 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 PEX2P28328 305 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 GABRA2P47869 451 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 TGM4P49221 684 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 IL13RA1P78552 427 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 FOXL1Q12952 345 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 PLEKHG7Q6ZR37 379 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 FAM220AQ7Z4H9 259 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 H1FXQ92522 213 aaKnown RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 TBX15Q96SF7 602 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 ZNF184Q99676 751 aaPredicted RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 FGF23Q9GZV9 251 aaPredicted RBP10.24□□□□□ -0.77
SS18-225ENST00000585121 PLEKHA1Q9HB21 404 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 NOX4Q9NPH5 578 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 RASL12Q9NYN1 266 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 USE1Q9NZ43 259 aa10.24□□□□□ -0.77
SS18-225ENST00000585121 OR2AT4A6NND4 320 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DHRS7CA6NNS2 312 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DLGAP1O14490 977 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 EI24O14681 340 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 ALPLP05186 524 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 RNASE1P07998 156 aaKnown RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 HKR1P10072 659 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 MMP9P14780 707 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 CFPP27918 469 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SLC9A3R2Q15599 337 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 LRRC36Q1X8D7 754 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DEFB112Q30KQ8 113 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 CDONQ4KMG0 1287 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 HAGHLQ6PII5 290 aaPredicted RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 ZBTB49Q6ZSB9 765 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 CCDC54Q8NEL0 328 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 ANGPTL6Q8NI99 470 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 AQP3Q92482 292 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 LHX4Q969G2 390 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 GPR173Q9NS66 373 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SLC25A10Q9UBX3 287 aaPredicted RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 SLC7A11Q9UPY5 501 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 POLDIP2Q9Y2S7 368 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 V9GYS6 101 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 A0A1B0GW55 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SIGLEC5O15389 551 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SYT7O43581 403 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 RHBDL1O75783 438 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 APOL3O95236 402 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SERPINA3P01011 423 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 ACAA1P09110 424 aaPredicted RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 NDUFB7P17568 137 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 HAAOP46952 286 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 HSPA13P48723 471 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 CAPZA1P52907 286 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 ODF4Q2M2E3 257 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 AWAT1Q58HT5 328 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DMRTC1Q5HYR2 192 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 MEDAGQ5VYS4 303 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 IZUMO2Q6UXV1 221 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 ZNF788Q6ZQV5 615 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 SSX6Q7RTT6 188 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 CATSPERDQ86XM0 798 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 KIR3DL3Q8N743 410 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 LY6G5BQ8NDX9 201 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 OR14K1Q8NGZ2 314 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 MRPL48Q96GC5 212 aaKnown RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 HRASLS5Q96KN8 279 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
SS18-225ENST00000585121 MYCBPQ99417 103 aaPredicted RBP10.23□□□□□ -0.77
SS18-225ENST00000585121 DCTN5Q9BTE1 182 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms