RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 Q3ZCU0 254 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 LCE1EQ5T753 118 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 SAXO2Q658L1 398 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 C3P1Q6ZMU1 363 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TMUB2Q71RG4 321 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 VN1R4Q7Z5H5 301 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 OFCC1Q8IZS5 231 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 SPERTQ8NA61 448 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 INO80EQ8NBZ0 244 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4F6Q8NGB9 312 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1J4Q8NGS1 313 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TWIST2Q8WVJ9 160 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 NEIL2Q969S2 332 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 C11orf24Q96F05 449 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PLEKHA8Q96JA3 519 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 RCHY1Q96PM5 261 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 APOL2Q9BQE5 337 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TBL1XR1Q9BZK7 514 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 DNTTIP1Q9H147 329 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 VCXQ9H320 206 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 SH2D2AQ9NP31 389 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 IL36GQ9NZH8 169 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 KLHL21Q9UJP4 597 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC22A14Q9Y267 594 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 ARL2BPQ9Y2Y0 163 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 STARD10Q9Y365 291 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 ABCA12Q86UK0 2595 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 VPS13AQ96RL7 3174 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CENPXA8MT69 81 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 DLGAP1O14490 977 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TAPBPO15533 448 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 RS1O15537 224 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 KLF7O75840 302 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 RCBTB2O95199 551 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 HPRP00739 348 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 FOLR1P15328 257 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 RPS4Y1P22090 263 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 GUCA1AP43080 201 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 HSPA13P48723 471 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 DAP3P51398 398 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 XKP51811 444 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 IST1P53990 364 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 NUP107P57740 925 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 RIPPLY1Q0D2K3 151 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TOMM34Q15785 309 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 UAP1Q16222 522 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM76BQ5HYJ3 339 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 C3orf33Q6P1S2 294 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM53Q6P2H8 277 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 EPGNQ6UW88 154 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 C9orf139Q6ZV77 190 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 COX15Q7KZN9 410 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC16A14Q7RTX9 510 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 COMMD6Q7Z4G1 85 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 LRRTM1Q86UE6 522 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CYP4Z2PQ8N1L4 340 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 COX18Q8N8Q8 333 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 LINC01555Q8NAE3 123 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP6V1C2Q8NEY4 427 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4A4PQ8NGN8 299 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1L6Q8NGR2 347 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5W2Q8NH69 310 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 MFSD8Q8NHS3 518 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 KCTD4Q8WVF5 259 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 KLK6Q92876 244 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 IL22RA2Q969J5 263 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TM4SF18Q96CE8 201 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC25A36Q96CQ1 311 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CCDC124Q96CT7 223 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 DNAJA3Q96EY1 480 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 LINC00479Q96M42 142 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CCT8L2Q96SF2 557 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB18Q9NP72 206 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF701Q9NV72 531 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TREM2Q9NZC2 230 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PDP1Q9P0J1 537 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 DKKL1Q9UK85 242 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CES1P1Q9UKY3 287 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 EXOGQ9Y2C4 368 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 MEMO1Q9Y316 297 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 FRYLO94915 3013 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TRGV5A0A0B4J1U4 118 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM120BA0PK00 339 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 GABRR3A8MPY1 467 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 C12orf71A8MTZ7 269 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 TRDCB7Z8K6 153 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 G3V2L1 256 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 RPL36A-HNRNPH2H7BZ11 118 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CXCR6O00574 342 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 SS18L1O75177 396 aaPredicted RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2J3O76001 311 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM107AO95990 144 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 CA1P00915 261 aaPredicted RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 IGHMP01871 453 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OPN1LWP04000 364 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 OR8G3PP0DMU2 310 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 GPX2P18283 190 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 HTR1EP28566 365 aa1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 PEBP1P30086 187 aaKnown RBP1.59□□□□□ -2.16
SMCHD1-211ENST00000584897 ARR3P36575 388 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms