RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MOV10Q9HCE1 1003 aaKnown RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 GPN1Q9HCN4 374 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 NUDT15Q9NV35 164 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 ING3Q9NXR8 418 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 SH3BGRL2Q9UJC5 107 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 SCP2D1Q9UJQ7 156 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 ZNF221Q9UK13 617 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 PLEKHA6Q9Y2H5 1048 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 FLNCQ14315 2725 aa8.04□□□□□ -1.12
SS18-220ENST00000582092 NCOA6Q14686 2063 aaPredicted RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
SS18-220ENST00000582092 USP9XQ93008 2570 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 IGKV1-9A0A0C4DH69 117 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 hCG_38984A0A1B0GV85 526 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 MBD3L4A6NDZ8 208 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 MBD3L3A6NE82 208 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 MBD3L5A6NJ08 208 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 TMEM14DPA8MWL7 114 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 J3QW42 95 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 ZNHIT1O43257 154 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 PRAF2O60831 178 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 RAB3DO95716 219 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 PLATP00750 562 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 TRAPPC2P0DI81 140 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 TRAPPC2BP0DI82 140 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 PTHLHP12272 177 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 CBR1P16152 277 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 MGMTP16455 207 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 AGAP20933 346 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 CPT2P23786 658 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 RAD52P43351 418 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 KIR2DL2P43627 348 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 CCR6P51684 374 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 GUCA2AQ02747 115 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 GK2Q14410 553 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 MEF2DQ14814 521 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 GABRA6Q16445 453 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 PNLIPRP3Q17RR3 467 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 PLA1AQ53H76 456 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 STEAP1BQ6NZ63 245 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 VWA1Q6PCB0 445 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 BHLHA15Q7RTS1 189 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 ZDHHC23Q8IYP9 409 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 GABRG1Q8N1C3 465 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 ZNF610Q8N9Z0 462 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 TMEM229BQ8NBD8 167 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 OR56B2PQ8NGI1 322 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 MBD3L2Q8NHZ7 208 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 GPX8Q8TED1 209 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 MUCL1Q96DR8 90 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 NEURL2Q9BR09 285 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 OR51B6Q9H340 312 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 TP63Q9H3D4 680 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 ZMAT3Q9HA38 289 aaKnown RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 OBP2BQ9NPH6 170 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 PLEKHJ1Q9NW61 149 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 B3GNT2Q9NY97 397 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 COQ3Q9NZJ6 369 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 ZNF224Q9NZL3 707 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 ZNF107Q9UII5 783 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 ZNF835Q9Y2P0 537 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 STARD10Q9Y365 291 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 RBMX2Q9Y388 322 aaKnown RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 NOP16Q9Y3C1 178 aaKnown RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 SPEF1Q9Y4P9 236 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 ALG5Q9Y673 324 aa8.03□□□□□ -1.12
SS18-220ENST00000582092 USP9YO00507 2555 aaPredicted RBP8.03□□□□□ -1.12
SS18-220ENST00000582092 ARHGAP21Q5T5U3 1957 aa8.02□□□□□ -1.12
SS18-220ENST00000582092 TMEM235A6NFC5 223 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 H3BUI4 141 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 SSNA1O43805 119 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 ZG16O60844 167 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 RLN1P04808 185 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 GNB3P16520 340 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 TUBG1P23258 451 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 ACKR3P25106 362 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 BLVRBP30043 206 aaPredicted RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 OPRM1P35372 400 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 ALDH3B1P43353 468 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 OR3A3P47888 321 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 RAG2P55895 527 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 PPP1CBP62140 327 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 RPS27AP62979 156 aaKnown RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 HGFACQ04756 655 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 PRDX4Q13162 271 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 CBX3Q13185 183 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 HLXQ14774 488 aaPredicted RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 PPA1Q15181 289 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 OR8B8Q15620 311 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 C11orf91Q3C1V1 193 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 RNASE10Q5GAN6 216 aaKnown RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 DMRTC1Q5HYR2 192 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 OLFML2AQ68BL7 652 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 COLCA1Q6ZS62 124 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 MRGPRGQ86SM5 289 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 GLCCI1Q86VQ1 547 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 TMEM17Q86X19 198 aa8.02□□□□□ -1.13
SS18-220ENST00000582092 CXorf67Q86X51 503 aaPredicted RBP8.02□□□□□ -1.13
SS18-220ENST00000582092 MKXQ8IYA7 352 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms