RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SIGLEC5	O15389	551 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RGS9	O75916	674 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RPSA	P08865	295 aa	Known RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	HKR1	P10072	659 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	FAH	P16930	419 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	HOXA4	Q00056	320 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OCLN	Q16625	522 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PLCXD3	Q63HM9	321 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	METAP1D	Q6UB28	335 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MOB3C	Q70IA8	216 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	BCL6B	Q8N143	479 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	TMEM86B	Q8N661	226 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	YIPF7	Q8N8F6	280 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR14K1	Q8NGZ2	314 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	NPRL2	Q8WTW4	380 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ST8SIA4	Q92187	359 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	AQP3	Q92482	292 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	TMIGD2	Q96BF3	282 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MRPL48	Q96GC5	212 aa	Known RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ZNF48	Q96MX3	618 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	PCGF1	Q9BSM1	259 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	C9orf16	Q9BUW7	83 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	FGF23	Q9GZV9	251 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SIRPD	Q9H106	197 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	GTF2A1L	Q9UNN4	478 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SLC22A13	Q9Y226	551 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	POLDIP2	Q9Y2S7	368 aa		10.41	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	TRBV23-1	A0A0A0MS06	115 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708		J3QT63	122 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	EI24	O14681	340 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	AKR7A2	O43488	359 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	MPZL2	O60487	215 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	AMY2B	P19961	511 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	GLRA1	P23415	457 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RPL15	P61313	204 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	ISL1	P61371	349 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SMIM21	Q3B7S5	101 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CEP78	Q5JTW2	689 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	FAM220A	Q7Z4H9	259 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	CATSPERD	Q86XM0	798 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	FAM216B	Q8N7L0	139 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	POC1A	Q8NBT0	407 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	OR10H4	Q8NGA5	316 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	SDSL	Q96GA7	329 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	TBX15	Q96SF7	602 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	DCTN5	Q9BTE1	182 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	WDR13	Q9H1Z4	485 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	RASSF4	Q9H2L5	321 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	UNKL	Q9H9P5	680 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	POMT1	Q9Y6A1	747 aa		10.4	□□□□□ -0.74
CDK5RAP3-222	ENST00000581708	IGHV1-69D	A0A0B4J2H0	117 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CENPVL3	A0A0U1RRI6	287 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PQLC2L	A1A4F0	135 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	FCN3	O75636	299 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RHBDL1	O75783	438 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SERPINA3	P01011	423 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	IGHV1-69	P01742	117 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	UBC	P0CG48	685 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PGA5	P0DJD9	388 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	MPZ	P25189	248 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CFP	P27918	469 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ARF6	P62330	175 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	GUCA2A	Q02747	115 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SLC9A3R2	Q15599	337 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	FDX2	Q6P4F2	183 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	HAGHL	Q6PII5	290 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SSX6	Q7RTT6	188 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CBR4	Q8N4T8	237 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	C3orf56	Q8N813	242 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	TBC1D15	Q8TC07	691 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PP6455	Q8WZ26	134 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RORB	Q92753	470 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ZDHHC16	Q969W1	377 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PPP1R14A	Q96A00	147 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	C1orf147	Q96MC9	270 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708		Q96MT0	163 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	GAFA1	Q96PS6	74 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ADI1	Q9BV57	179 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	TTTY10	Q9BZA0	68 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PKIB	Q9C010	78 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PLEKHA1	Q9HB21	404 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ACOXL	Q9NUZ1	547 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ZNF222	Q9UK12	451 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SLC7A11	Q9UPY5	501 aa		10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CAB39	Q9Y376	341 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ANKRD61	A6NGH8	418 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	POM121C	A8CG34	1229 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708		J3QRE1	110 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708		M0R1W7	72 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SYT7	O43581	403 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	GATB	O75879	557 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RPP14	O95059	124 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ISG15	P05161	165 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SFTPB	P07988	381 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PSG2	P11465	335 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CCR9	P51686	369 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ACTA2	P62736	377 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ACTG2	P63267	376 aa		10.38	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	IL24	Q13007	206 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms