RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CDS1Q92903 461 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 PSMG2Q969U7 264 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ELSPBP1Q96BH3 223 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TCEAL4Q96EI5 215 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 OR5B12Q96R08 314 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 NUDT9Q9BW91 350 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 PLA2G2FQ9BZM2 168 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 PLGRKTQ9HBL7 147 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 TMBIM4Q9HC24 238 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 PLSCR3Q9NRY6 295 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 CLN6Q9NWW5 311 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 MMACHCQ9Y4U1 282 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 V9GYQ6 96 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ZFHX2Q9C0A1 2572 aaPredicted RBP3.11□□□□□ -1.91
NF1-220ENST00000581113 PLXNA3P51805 1871 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 DENND4AQ7Z401 1863 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 MYO10Q9HD67 2058 aa3.11□□□□□ -1.91
NF1-220ENST00000581113 ATRXP46100 2492 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 TRAV8-7A0A075B6U6 113 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 GFYI3L273 518 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 J3QLI3 93 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 PIRO00625 290 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 MAGEB4O15481 346 aaPredicted RBP3.1□□□□□ -1.91
NF1-220ENST00000581113 TGOLN2O43493 480 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 MPZL1O95297 269 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ATP6V1G2O95670 118 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 RHOCP08134 193 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 OR4Q2P0C623 313 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ACSM4P0C7M7 580 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 RNH1P13489 461 aaKnown RBP3.1□□□□□ -1.91
NF1-220ENST00000581113 RAB4AP20338 218 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 DTYMKP23919 212 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ATP5A1P25705 553 aaKnown RBP3.1□□□□□ -1.91
NF1-220ENST00000581113 CD79BP40259 229 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 RFC3P40938 356 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 CCR2P41597 374 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ACOT2P49753 483 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 RHOAP61586 193 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 MRPS22P82650 360 aaKnown RBP3.1□□□□□ -1.91
NF1-220ENST00000581113 AESQ08117 197 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 GGTLC2Q14390 218 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ARL6IP1Q15041 203 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 TRIM16LQ309B1 348 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 RFX4Q33E94 735 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ZCWPW2Q504Y3 356 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 TPRG1LQ5T0D9 272 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 DUPD1Q68J44 220 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ZNF720Q7Z2F6 126 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 C9orf40Q8IXQ3 194 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.1□□□□□ -1.91
NF1-220ENST00000581113 ATP6V1C2Q8NEY4 427 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 OR5B17Q8NGF7 314 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 OR2Y1Q8NGV0 311 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 OR2AE1Q8NHA4 323 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 NEK7Q8TDX7 302 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ADAMTS16Q8TE57 1224 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 AP3S1Q92572 193 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 CLDN23Q96B33 292 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ZNF414Q96IQ9 312 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ZNF488Q96MN9 340 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 SERPINB12Q96P63 405 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 NIPSNAP3BQ9BS92 247 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ASB7Q9H672 318 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 CAB39LQ9H9S4 337 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 C12orf4Q9NQ89 552 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 HEBP1Q9NRV9 189 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 ANAPC11Q9NYG5 84 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 OARD1Q9Y530 152 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 C2orf16Q68DN1 1984 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 MYO15AQ9UKN7 3530 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 DMDP11532 3685 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 USP34Q70CQ2 3546 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 VWA8A3KMH1 1905 aa3.1□□□□□ -1.91
NF1-220ENST00000581113 PTPRZ1P23471 2315 aaPredicted RBP3.1□□□□□ -1.91
NF1-220ENST00000581113 DCTN6O00399 190 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 MPZL2O60487 215 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 SERPINA1P01009 418 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 CATP04040 527 aaKnown RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 OCM2P0CE71 109 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 CD1EP15812 388 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 CSNK2A2P19784 350 aaPredicted RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 OPRD1P41143 372 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 RPS9P46781 194 aaKnown RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 OR3A4PP47883 348 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 OR10A3P58181 314 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 PSME3P61289 254 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 MAGOHP61326 146 aaKnown RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 PRKCDQ05655 676 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 RAB40BQ12829 278 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 MED21Q13503 144 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 RAB31Q13636 194 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 LAGE3Q14657 143 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 GCSAMLQ5JQS6 135 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 CCNJQ5T5M9 372 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 UFSP1Q6NVU6 142 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 SLC25A48Q6ZT89 311 aaKnown RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 FAM92BQ6ZTR7 304 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 CCDC121Q6ZUS5 278 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 COX15Q7KZN9 410 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 SSX6Q7RTT6 188 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms