RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 ACAA1P09110 424 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SPARCP09486 303 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PRKXP51817 358 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CAV3P56539 151 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RPL13AP3Q6NVV1 102 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DCXRQ7Z4W1 244 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CPLX4Q7Z7G2 160 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR51L1Q8NGJ5 315 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DUX3Q96PT4 197 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RAB3IPQ96QF0 476 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DNTTIP1Q9H147 329 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OPA3Q9H6K4 179 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CENPMQ9NSP4 180 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF446Q9NWS9 450 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CDH10Q9Y6N8 788 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLC2A1P11166 492 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 HSD17B1P14061 328 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 FMO3P31513 532 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OTX1P32242 354 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SAMD4BQ5PRF9 694 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 LYPD4Q6UWN0 246 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OVCH2Q7RTZ1 564 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZDHHC21Q8IVQ6 265 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLC37A3Q8NCC5 494 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ANGPTL6Q8NI99 470 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNRF4Q8WWF5 429 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLAMF6Q96DU3 332 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 MALSU1Q96EH3 234 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 KCNJ15Q99712 375 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 IL1RAPQ9NPH3 570 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 HILPDAQ9Y5L2 63 aa10.51□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TNFRSF11BO00300 401 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF593O00488 134 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ARPC2O15144 300 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TBX1O43435 398 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 XRCC2O43543 280 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 KRT36O76013 467 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 LY86O95711 162 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CCL3L1P16619 93 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 GNALP38405 381 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DDOSTP39656 456 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 MYCNOSP40205 109 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ENTPD1P49961 510 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLC34A1Q06495 639 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 DYNC1I2Q13409 638 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ABCA11PQ4W5N1 156 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 C9orf152Q5JTZ5 239 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 LDLRAD2Q5SZI1 272 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TMEM200BQ69YZ2 307 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 LINC00471Q8N535 108 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR4M1Q8NGD0 313 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR9Q2Q8NGE9 314 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 BCAS4Q8TDM0 211 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 FOXRED1Q96CU9 486 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CDRT15Q96T59 188 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 COMMD3-BMI1R4GMX3 469 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 RYR1P21817 5038 aa10.5□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR2AT4A6NND4 320 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF878C9JN71 531 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 H3BUI4 141 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 JTBO76095 146 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ANXA2P07355 339 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PSKH1P11801 424 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CD24P25063 80 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLC15A1P46059 708 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SLC25A1P53007 311 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR12D2P58182 307 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 GRB2P62993 217 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 MXRA7P84157 204 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TIGD6Q17RP2 521 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PGAM4Q8N0Y7 254 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZNF511Q8NB15 262 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 OR5K1Q8NHB7 308 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CAPSLQ8WWF8 208 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TSSK6Q9BXA6 273 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 FAM107BQ9H098 131 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 YY1AP1Q9H869 796 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SP140LQ9H930 580 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 MED4Q9NPJ6 270 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TBC1D23Q9NUY8 699 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 IL20Q9NYY1 176 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 NLKQ9UBE8 527 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 CD300AQ9UGN4 299 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 BAIAP2Q9UQB8 552 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SMAD5-AS1Q9Y6J3 95 aa10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 PLECQ15149 4684 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-213ENST00000579605 hCG_1809904A0A1W2PP81 198 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 A0A1W2PPE2 198 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 A0A1W2PPH5 198 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 A0A1W2PR64 198 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 A0A1W2PRV1 198 aa10.48□□□□□ -0.73
CDK5RAP3-213ENST00000579605 TIPRLO75663 272 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms