RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 ZDHHC23Q8IYP9 409 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 OR51G2Q8NGK0 314 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 H1FXQ92522 213 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 PGAM5Q96HS1 289 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 NCOR1P1Q9H4R4 102 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 SIRT7Q9NRC8 400 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 ADA2Q9NZK5 511 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF222Q9UK12 451 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 PITPNC1Q9UKF7 332 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 LYVE1Q9Y5Y7 322 aa9.16□□□□□ -0.94
SMARCE1-214ENST00000578112 A0A1W2PQ09 198 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 H3BUI4 141 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 H3BUX3 64 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 TNFRSF11BO00300 401 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 CDIPTO14735 213 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 DIRAS1O95057 198 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 DCTDP32321 178 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 ETV1P50549 477 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 ARHGDIBP52566 201 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF121P58317 390 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 ERVFRD-1P60508 538 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 GNG3P63215 75 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 PRDX4Q13162 271 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 SLC35F1Q5T1Q4 408 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 HCP5Q6MZN7 132 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 DEGS2Q6QHC5 323 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF554Q86TJ5 538 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 SSX3Q99909 188 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 ABHD6Q9BV23 337 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 TSSK6Q9BXA6 273 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 EGLN3Q9H6Z9 239 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 SEBOXQ9HB31 216 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 CMYA5Q8N3K9 4069 aa9.15□□□□□ -0.94
SMARCE1-214ENST00000578112 A0A0U1RQV5 110 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 SCGB1D2O95969 90 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 H2BFMP0C1H6 154 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 PSMA6P60900 246 aaKnown RBP9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 CSNK2BP67870 215 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 CRMP1Q14194 572 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 NDUFA5Q16718 116 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 SLC35D3Q5M8T2 416 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 MZT2AQ6P582 158 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF561Q8N587 486 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 KLHDC1Q8N7A1 406 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 OR5A2Q8NGI9 324 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 USE1Q9NZ43 259 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.95
SMARCE1-214ENST00000578112 OR2AT4A6NND4 320 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 ARPC2O15144 300 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 NOS1APO75052 506 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 PSKH1P11801 424 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 AZGP1P25311 298 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 MAP2K3P46734 347 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 IKZF1Q13422 519 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 DGUOKQ16854 277 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 C16orf89Q6UX73 402 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 FAM57BQ71RH2 274 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 TIGD4Q8IY51 512 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 DUS3LQ96G46 650 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 H0YAE9 185 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 PRODHO43272 600 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 TSC22D2O75157 780 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 FBXO24O75426 580 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 CTRB1P17538 263 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 GLRA1P23415 457 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 POU1F1P28069 291 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 CEACAM21Q3KPI0 293 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 CTRB2Q6GPI1 263 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 CADM3Q8N126 398 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 OR8D4Q8NGM9 314 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 WIPF2Q8TF74 440 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 RNF170Q96K19 258 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 GPR61Q9BZJ8 451 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 OR51I2Q9H344 312 aa9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMARCE1-214ENST00000578112 G3V4G9 280 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 BAG2O95816 211 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 SLC2A1P11166 492 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 NDUFB7P17568 137 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DCTN2Q13561 401 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 MICAQ29983 383 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 SMIM21Q3B7S5 101 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 SIGIRRQ6IA17 410 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 Q6ZPA2 131 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNF511Q8NB15 262 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 POC1AQ8NBT0 407 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 OTOSQ8NHW6 89 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 ZNRF4Q8WWF5 429 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 C8orf4Q9NR00 106 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 A0A1B0GW55 424 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 FAM90A8PA6NJQ4 464 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUS4LO95620 317 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 LYNP07948 512 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4L2P0CJ85 424 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4L3P0CJ86 424 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4L4P0CJ87 422 aa9.13□□□□□ -0.95
SMARCE1-214ENST00000578112 DUX4L5P0CJ88 424 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms