RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 GPM6AP51674 278 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 BLVRAP53004 296 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 DLX6P56179 175 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 SF3A3Q12874 501 aaKnown RBP eCLIP8□□□□□ -1.13
CALCOCO2-227ENST00000575560 CRMP1Q14194 572 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 EIF2B1Q14232 305 aaKnown RBP8□□□□□ -1.13
CALCOCO2-227ENST00000575560 GFOD2Q3B7J2 385 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 TMEM95Q3KNT9 176 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 LINC01590Q5TEZ4 76 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 RPL13AP3Q6NVV1 102 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 HACD2Q6Y1H2 254 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 TIGD4Q8IY51 512 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZDHHC23Q8IYP9 409 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR11H6Q8NGC7 330 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR4M1Q8NGD0 313 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR52L1Q8NGH7 329 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR8D4Q8NGM9 314 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF671Q8TAW3 534 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 PGAM5Q96HS1 289 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 PYURFQ96I23 114 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 LYZL4Q96KX0 146 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 AMELYQ99218 206 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 GORASP2Q9H8Y8 452 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 BRD7Q9NPI1 651 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 ABCB10Q9NRK6 738 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 RASL12Q9NYN1 266 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 USE1Q9NZ43 259 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 ABCD2Q9UBJ2 740 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 TBL2Q9Y4P3 447 aaKnown RBP8□□□□□ -1.13
CALCOCO2-227ENST00000575560 TSSC4Q9Y5U2 329 aaPredicted RBP8□□□□□ -1.13
CALCOCO2-227ENST00000575560 CDH10Q9Y6N8 788 aa8□□□□□ -1.13
CALCOCO2-227ENST00000575560 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 RFPL4AA6NLU0 287 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 FAM90A22PA8MWA6 464 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 RFPL4AL1F8VTS6 287 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 PF4P02776 101 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ALDOBP05062 364 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ARG1P05089 322 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 HOXD3P31249 432 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 PRDX2P32119 198 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 CAPZA1P52907 286 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 HMGA2P52926 109 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 GNG3P63215 75 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 COL10A1Q03692 680 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF273Q14593 569 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 SSX2Q16385 188 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 CEACAM21Q3KPI0 293 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF626Q68DY1 528 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF782Q6ZMW2 699 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ACP7Q6ZNF0 438 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 CCDC121Q6ZUS5 278 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF561Q8N587 486 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR6K6Q8NGW6 343 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR2T27Q8NH04 317 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 AQP3Q92482 292 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 FOXRED1Q96CU9 486 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 HIST1H2AAQ96QV6 131 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 EFCAB1Q9HAE3 211 aa7.99□□□□□ -1.13
CALCOCO2-227ENST00000575560 TCRBV4S1A1TA0A5B7 111 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF732B4DXR9 585 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 E9PQ18 207 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 F2RL2O00254 374 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 SLC1A7O00341 560 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 GASTP01350 101 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 NHLRC4P0CG21 123 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 JUNBP17275 347 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 RRM2P31350 389 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 LCN8Q6JVE9 175 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 RASSF6Q6ZTQ3 369 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 CENPVQ7Z7K6 275 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 LINC00482Q8N8I6 264 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR5A2Q8NGI9 324 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR13D1Q8NGV5 346 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 OR4Q3Q8NH05 313 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 MYDGFQ969H8 173 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 INTS14Q96SY0 518 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 BTBD10Q9BSF8 475 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 IL1RAPQ9NPH3 570 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 FGFR1OP2Q9NVK5 253 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 TENM2Q9NT68 2774 aa7.98□□□□□ -1.13
CALCOCO2-227ENST00000575560 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 DNAH7Q8WXX0 4024 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 NOS1APO75052 506 aaPredicted RBP7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 RBP4P02753 201 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 TK1P04183 234 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 H2BFMP0C1H6 154 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 AZGP1P25311 298 aaKnown RBP7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 GSTT1P30711 240 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 PSME3P61289 254 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 DMRTC1Q5HYR2 192 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 CEP78Q5JTW2 689 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 HAGHLQ6PII5 290 aaPredicted RBP7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 SHFQ7M4L6 423 aa7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 ERI1Q8IV48 349 aaKnown RBP7.97□□□□□ -1.13
CALCOCO2-227ENST00000575560 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms