RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PMS2P1A4D2B8 440 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 DHRS7CA6NNS2 312 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 DNPH1O43598 174 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 CSTBP04080 98 aaKnown RBP7.81□□□□□ -1.16
NCBP3-204ENST00000574911 FAM157CP0CG43 387 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 CCL4P13236 92 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 HOXA6P31267 233 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 ECI1P42126 302 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 TRA2AQ13595 282 aaKnown RBP eCLIP7.81□□□□□ -1.164e-8■■■■■ 29.1
NCBP3-204ENST00000574911 RAB32Q13637 225 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 NKAPLQ5M9Q1 402 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 DRAM2Q6UX65 266 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 C6orf201Q7Z4U5 140 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 BOLLQ8N9W6 283 aaKnown RBP7.81□□□□□ -1.16
NCBP3-204ENST00000574911 SEMA6DQ8NFY4 1073 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 OR2Y1Q8NGV0 311 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 SLC5A7Q9GZV3 580 aa7.81□□□□□ -1.16
NCBP3-204ENST00000574911 GJE1A6NN92 205 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 NUDT19A8MXV4 375 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 C9J4A7 227 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 SYNGR3O43761 229 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ATG12O94817 140 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 GABRR1P24046 479 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ACKR3P25106 362 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ARHGDIBP52566 201 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZFP36L1Q07352 338 aaKnown RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 RAB35Q15286 201 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 KRTAP27-1Q3LI81 207 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZNF468Q5VIY5 522 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 RPUSD3Q6P087 351 aaKnown RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 TMEM156Q8N614 296 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 SPSB1Q96BD6 273 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ELL3Q9HB65 397 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 DECR2Q9NUI1 292 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 HPF1Q9NWY4 346 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 C14orf166Q9Y224 244 aaKnown RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 SPEGQ15772 3267 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 NSG1A0A0A6YYJ2 146 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 FAM74A7A6NL05 159 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ATP6V1G2-DDX39BF2Z307 99 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 IFNA2P01563 188 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 SERPINA5P05154 406 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 CTSDP07339 412 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 CST2P09228 141 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PET100P0DJ07 73 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 RAC3P60763 192 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 RBM39Q14498 530 aaKnown RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 MST1LQ2TV78 715 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 FAM74A3Q4VXF1 159 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 C10orf91Q5T1B1 145 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZNF585AQ6P3V2 769 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 WDR5BQ86VZ2 330 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 GPR137CQ8N3F9 429 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 OR51F2Q8NH61 342 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 TMED6Q8WW62 240 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ARL11Q969Q4 196 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 NARS2Q96I59 477 aaKnown RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZNF2Q9BSG1 426 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 HDHD3Q9BSH5 251 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 METTL9Q9H1A3 318 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZC4H2Q9NQZ6 224 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PLSCR2Q9NRY7 297 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZNF701Q9NV72 531 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PLEKHJ1Q9NW61 149 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 C1orf123Q9NWV4 160 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 EDARQ9UNE0 448 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PRUNE2Q8WUY3 3088 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ABCD4O14678 606 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 SGCEO43556 437 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ACTL6AO96019 429 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 KNG1P01042 644 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 HOXB5P09067 269 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 TMEM225BP0DP42 221 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ADCYAP1P18509 176 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 NTF4P34130 210 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 MTCP1P56278 107 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 HGFACQ04756 655 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PABPC1L2AQ5JQF8 200 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PLXDC2Q6UX71 529 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ASCL4Q6XD76 172 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 OR1F12Q8NHA8 337 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
NCBP3-204ENST00000574911 REEP6Q96HR9 211 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 AIFM2Q9BRQ8 373 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 IER2Q9BTL4 223 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 PRO3102Q9H379 93 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 MMP26Q9NRE1 261 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 ANXA10Q9UJ72 324 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 HSF4Q9ULV5 492 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 MEMO1Q9Y316 297 aa7.8□□□□□ -1.16
NCBP3-204ENST00000574911 IGKV1-27A0A075B6S5 117 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 CCDC187A0A096LP49 1063 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 CRYM-AS1A6NIL9 109 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 MASP2O00187 686 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 TERTO14746 1132 aaKnown RBP7.79□□□□□ -1.16
NCBP3-204ENST00000574911 HKR1P10072 659 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 SRD5A2P31213 254 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 ZNF169Q14929 603 aaPredicted RBP7.79□□□□□ -1.16
NCBP3-204ENST00000574911 CCDC157Q569K6 752 aa7.79□□□□□ -1.16
NCBP3-204ENST00000574911 PDSS1Q5T2R2 415 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms