RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 STEAP1BQ6NZ63 245 aa24.51■■□□□ 1.51
CTDNEP1-210ENST00000574322 FJX1Q86VR8 437 aa24.51■■□□□ 1.51
CTDNEP1-210ENST00000574322 C17orf78Q8N4C9 275 aa24.51■■□□□ 1.51
CTDNEP1-210ENST00000574322 METTL9Q9H1A3 318 aa24.51■■□□□ 1.51
CTDNEP1-210ENST00000574322 MCUBQ9NWR8 336 aa24.51■■□□□ 1.51
CTDNEP1-210ENST00000574322 IL36GQ9NZH8 169 aa24.51■■□□□ 1.51
CTDNEP1-210ENST00000574322 MEIS3P1A6NDR6 274 aa24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 SOCS1O15524 211 aa24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZNF780AO75290 641 aaPredicted RBP24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 MECP2P51608 486 aaKnown RBP24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 P2RY6Q15077 328 aa24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 PLCXD3Q63HM9 321 aa24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 FAM57AQ8TBR7 257 aa24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 PTTG3PQ9NZH4 202 aa24.5■■□□□ 1.51
CTDNEP1-210ENST00000574322 A0A0A6YYJ9 748 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 PEX14O75381 377 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 CD3DP04234 171 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 TMEM225BP0DP42 221 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 CBR1P16152 277 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 GNB3P16520 340 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 PER3P56645 1201 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 RRAS2P62070 204 aaPredicted RBP24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 FAAP20Q6NZ36 180 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 FTMTQ8N4E7 242 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 WDR31Q8NA23 367 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 OR51T1Q8NGJ9 327 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 KCNK7Q9Y2U2 307 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 MFNGO00587 321 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 CYB5AP00167 134 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 TPOP07202 933 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 CPT2P23786 658 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 EIF2B2P49770 351 aaKnown RBP24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 MRPL49Q13405 166 aaKnown RBP24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 HLXQ14774 488 aaPredicted RBP24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 ARL6IP1Q15041 203 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 POFUT1Q9H488 388 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 OBP2BQ9NPH6 170 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 ANAPC10Q9UM13 185 aa24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 PRRC2CQ9Y520 2896 aaKnown RBP24.49■■□□□ 1.51
CTDNEP1-210ENST00000574322 KMT2BQ9UMN6 2715 aaPredicted RBP24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZNF850A8MQ14 1090 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 PRAF2O60831 178 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 SERPINA2P20848 420 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 TRAPPC6BQ86SZ2 158 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZNF610Q8N9Z0 462 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 OR4D10Q8NGI6 311 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 Q96M66 194 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZNF221Q9UK13 617 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 SPTA1P02549 2419 aa24.48■■□□□ 1.51
CTDNEP1-210ENST00000574322 CD300LBA8K4G0 201 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 IGKV3-15P01624 115 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 TDGF1P3P51864 188 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 PDZK1IP1Q13113 114 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 RBMS2Q15434 407 aaKnown RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 BEND4Q6ZU67 534 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 RFPL4BQ6ZWI9 263 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 CD163Q86VB7 1156 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZSCAN4Q8NAM6 433 aaPredicted RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 OR10K1Q8NGX5 313 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 NPDC1Q9NQX5 325 aaPredicted RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 IGSF10Q6WRI0 2623 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 PQLC2LA1A4F0 135 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZNF736B4DX44 427 aaPredicted RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 SSX5O60225 188 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 CA11O75493 328 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 PRDX4Q13162 271 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 CEACAM21Q3KPI0 293 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 ATAD3CQ5T2N8 411 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 ZNF782Q6ZMW2 699 aaPredicted RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 MRPS24Q96EL2 167 aaKnown RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 POM121Q96HA1 1249 aa24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 PAPOLGQ9BWT3 736 aaKnown RBP24.47■■□□□ 1.51
CTDNEP1-210ENST00000574322 RAB3DO95716 219 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 IL2RAP01589 272 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 NAT1P18440 290 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 RSU1Q15404 277 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 FBXW12Q6X9E4 464 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 MYPOPQ86VE0 399 aaPredicted RBP24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 CISD2Q8N5K1 135 aaKnown RBP24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 NUDCD2Q8WVJ2 157 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 ARHGAP5-AS1Q96IT6 56 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 EIF3KQ9UBQ5 218 aaKnown RBP24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 GPR160Q9UJ42 338 aa24.46■■□□□ 1.51
CTDNEP1-210ENST00000574322 AKR7A2O43488 359 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 CELA3BP08861 270 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 MPZP25189 248 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 HOXC12P31275 282 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 CEACAM8P31997 349 aaPredicted RBP24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 ZDHHC23Q8IYP9 409 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 DVL3Q92997 716 aaPredicted RBP24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 MED30Q96HR3 178 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 BBC3Q96PG8 261 aaPredicted RBP24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 OPN3Q9H1Y3 402 aaPredicted RBP24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 ELL3Q9HB65 397 aaPredicted RBP24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 PCDHB16Q9NRJ7 776 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 ZFYVE26Q68DK2 2539 aa24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 INTS1Q8N201 2190 aaKnown RBP24.45■■□□□ 1.5
CTDNEP1-210ENST00000574322 A0A1B0GUH1 482 aa24.44■■□□□ 1.5
CTDNEP1-210ENST00000574322 SPRY1O43609 319 aaPredicted RBP24.44■■□□□ 1.5
CTDNEP1-210ENST00000574322 TBPP20226 339 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms