RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ZSCAN4Q8NAM6 433 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 PXT1Q8NFP0 134 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 OR5D18Q8NGL1 313 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 KCNG3Q8TAE7 436 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 DVL3Q92997 716 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 BORCS5Q969J3 196 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 MRPL24Q96A35 216 aaKnown RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 C1orf147Q96MC9 270 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 ADAT1Q9BUB4 502 aaKnown RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 METTL9Q9H1A3 318 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 NKIRAS2Q9NYR9 191 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 MYEF2Q9P2K5 600 aaKnown RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 TMEM14DPA8MWL7 114 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 SHISA9B4DS77 424 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 J3QRK9 145 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 ZNF780AO75290 641 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-209ENST00000573474 NR4A2P43354 598 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 PITPNBP48739 271 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 MZT1Q08AG7 82 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 UNC119Q13432 240 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 IL18Q14116 193 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 GPR176Q14439 515 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 RSU1Q15404 277 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 FAM189A2Q15884 450 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 FAM76BQ5HYJ3 339 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 OR10K2Q6IF99 312 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 ADAM5Q6NVV9 412 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 Q6ZR03 302 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 CDH24Q86UP0 819 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 DMRTC2Q8IXT2 367 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-209ENST00000573474 SAXO1Q8IYX7 474 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
CCDC40-209ENST00000573474 CST11Q9H112 138 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 CXXC4Q9H2H0 198 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 ELL3Q9HB65 397 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-209ENST00000573474 DIABLOQ9NR28 239 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 PCDHB16Q9NRJ7 776 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 RNF115Q9Y4L5 304 aa11.67□□□□□ -0.54
CCDC40-209ENST00000573474 SMG1Q96Q15 3661 aaKnown RBP11.67□□□□□ -0.54
CCDC40-209ENST00000573474 PLSCR5A0PG75 271 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 LRP5LA4QPB2 252 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 METTL21EPA6NDL7 271 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 TMEM210A6NLX4 147 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 H0YL77 283 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 MLNRO43193 412 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 SPRY1O43609 319 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-209ENST00000573474 CDC14BO60729 498 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 CTAG2O75638 210 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 CRTAPO75718 401 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-209ENST00000573474 TPPPO94811 219 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 PLATP00750 562 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 OR4A8P0C604 315 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 CDK2P24941 298 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 HAAOP46952 286 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 DCTN2Q13561 401 aaKnown RBP11.66□□□□□ -0.54
CCDC40-209ENST00000573474 ADIPOQQ15848 244 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 SLC22A6Q4U2R8 563 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 PYDC2Q56P42 97 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 PYHIN1Q6K0P9 492 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 SLC25A26Q70HW3 274 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 TMEM200AQ86VY9 491 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 CALHM1Q8IU99 346 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 MKXQ8IYA7 352 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 ZNF611Q8N823 705 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 DTX3Q8N9I9 347 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 FAM222BQ8WU58 562 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 FAM46BQ96A09 425 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 PHF21AQ96BD5 680 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 PKIBQ9C010 78 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 OR51I2Q9H344 312 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 MSL2Q9HCI7 577 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 C14orf119Q9NWQ9 140 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 IL36GQ9NZH8 169 aa11.66□□□□□ -0.54
CCDC40-209ENST00000573474 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-209ENST00000573474 A0A0A6YYH2 397 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 A0A0G2JMP0 313 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 A0A0X1KG70 313 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 WIPF3A6NGB9 483 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 A6NJ64 397 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 DEFB108AA8MXU0 73 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 E7EQL1 145 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 SIAH2O43255 324 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 XRCC3O43542 346 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 ANGPTL7O43827 346 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 SCGNO76038 276 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 KDM4BO94953 1096 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 MPIG6BO95866 241 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 CYB5AP00167 134 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 CSTBP04080 98 aaKnown RBP11.65□□□□□ -0.54
CCDC40-209ENST00000573474 LOXP28300 417 aaPredicted RBP11.65□□□□□ -0.54
CCDC40-209ENST00000573474 MNDAP41218 407 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 PITPNAQ00169 270 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 MADCAM1Q13477 382 aa11.65□□□□□ -0.54
CCDC40-209ENST00000573474 ZNF79Q15937 498 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms