RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SCN2AQ99250 2005 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 MDC1Q14676 2089 aaKnown RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 ARHGEF17Q96PE2 2063 aaPredicted RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 IQCMA0A1B0GVH7 501 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 LINC00862A6NCI5 91 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 F6UZH7 168 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 DUSP1P28562 367 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 SRD5A2P31213 254 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 OTX1P32242 354 aaPredicted RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 SSTR5P35346 364 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 TIMP3P35625 211 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 KIR3DL1P43629 444 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 CAV2P51636 162 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 CRISP3P54108 245 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 RPS18P62269 152 aaKnown RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 SNRPEP62304 92 aaKnown RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 SLC35A1P78382 337 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 RAE1P78406 368 aaKnown RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 ZNF415Q09FC8 603 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 PGGHGQ32M88 737 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 CDNFQ49AH0 187 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 CLEC12AQ5QGZ9 265 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 AVPI1Q5T686 147 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 TMEM205Q6UW68 189 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 SYS1Q8N2H4 156 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 OR2V2Q96R30 315 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 APOL4Q9BPW4 351 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 PCGF1Q9BSM1 259 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 THAP7Q9BT49 309 aaPredicted RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 TMEM45AQ9NWC5 275 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 RAB26Q9ULW5 256 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 B9D1Q9UPM9 204 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 PTPRQQ9UMZ3 2332 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 A0A0G2JMP0 313 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 MANBAO00462 879 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 SIGLEC5O15389 551 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 FZD7O75084 574 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 S1PR2O95136 353 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 CELA2BP08218 269 aaPredicted RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 BMP5P22003 454 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 GNRHRP30968 328 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 ATP4BP51164 291 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 SNRPNP63162 240 aaKnown RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 RPL38P63173 70 aaKnown RBP5.85□□□□□ -1.47
SMG1-217ENST00000569764 CANT1Q8WVQ1 401 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 DYRK2Q92630 601 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 RORBQ92753 470 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 ITCHQ96J02 903 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 IL4I1Q96RQ9 567 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 SYNPO2LQ9H987 977 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 CLN6Q9NWW5 311 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 AMDHD2Q9Y303 409 aa5.85□□□□□ -1.47
SMG1-217ENST00000569764 LOC102723532A0A0G2JNH3 316 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 GNGT2O14610 69 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 NBR2O15453 112 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 TBX6O95947 436 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 CYB5AP00167 134 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 ZNF182P17025 639 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 IMPA1P29218 277 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 PPICP45877 212 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 DSCR4P56555 118 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 MTPNP58546 118 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 PCBD1P61457 104 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 PKIAP61925 76 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 C1QL3Q5VWW1 255 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 WDR25Q64LD2 544 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 ANKRD34AQ69YU3 496 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 ZNF740Q8NDX6 193 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 OR13G1Q8NGZ3 307 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 SNRNP40Q96DI7 357 aaKnown RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 ABCG5Q9H222 651 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 P2RX2Q9UBL9 471 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 ZNF391Q9UJN7 358 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 KIAA1324LA8MWY0 1029 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 IMPA2O14732 288 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 EIF4E2O60573 245 aaKnown RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 F13BP05160 661 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 CRYGBP07316 175 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 POLR2JP52435 117 aaKnown RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 BATFQ16520 125 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 OGFRL1Q5TC84 451 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 BICRALQ6AI39 1079 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 C16orf89Q6UX73 402 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 OR5B12Q96R08 314 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 RSPO3Q9BXY4 272 aaPredicted RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 EXO1Q9UQ84 846 aaKnown RBP5.84□□□□□ -1.47
SMG1-217ENST00000569764 A3GALT2U3KPV4 340 aa5.84□□□□□ -1.47
SMG1-217ENST00000569764 COL6A6A6NMZ7 2263 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 TCRBV3S1A0A5B6 114 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 M0R143 59 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 SULT2B1O00204 365 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 CLIC3O95833 236 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 MBPP02686 304 aaPredicted RBP5.84□□□□□ -1.48
SMG1-217ENST00000569764 KLK1P06870 262 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 HOXB9P17482 250 aaPredicted RBP5.84□□□□□ -1.48
SMG1-217ENST00000569764 DDOSTP39656 456 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 SIRPAP78324 504 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 DGUOKQ16854 277 aa5.84□□□□□ -1.48
SMG1-217ENST00000569764 SPANXN4Q5MJ08 99 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms