RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SSC5DA1L4H1 1573 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 RER1O15258 196 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 MELTFP08582 738 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PRSS56P0CW18 603 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 GNG10P50151 68 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 LY6G5CQ5SRR4 150 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM164Q5U3C3 297 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 SAMD13Q5VXD3 122 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TXNDC8Q6A555 127 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PARM1Q6UWI2 310 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 SPNS2Q8IVW8 549 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 CHST14Q8NCH0 376 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 OR1L4Q8NGR5 311 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 LIPHQ8WWY8 451 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FOXJ1Q92949 421 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF707Q96C28 371 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PLA2G12AQ9BZM1 189 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 AUP1Q9Y679 476 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 MTCH2Q9Y6C9 303 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TRBV11-1A0A0K0K1C0 115 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM272A0A1B0GTI8 110 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PRAMEF25A6NGN4 478 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 DEGS1O15121 323 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 OR5AL1P0C617 328 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FAM87AP0C7U9 286 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PTNP21246 168 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 GGTLC2Q14390 218 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ANKRD55Q3KP44 614 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PRAMEF5Q5TYX0 476 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PRAMEF6Q5VXH4 476 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 KLHDC7BQ96G42 594 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ADTRPQ96IZ2 230 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 MRGPRX4Q96LA9 322 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 LINC00615Q96LM1 132 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FBXO4Q9UKT5 387 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 IL33O95760 270 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 HIST1H1EP10412 219 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 SLC25A6P12236 298 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 RAET1LQ5VY80 246 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ALKAL1Q6UXT8 129 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR52N4Q8NGI2 321 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ISOC2Q96AB3 205 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 WDR13Q9H1Z4 485 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 LIPGQ9Y5X9 500 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PTGESO14684 152 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ZFAND5O76080 213 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 TTC32Q5I0X7 151 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 CARFQ8N187 725 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 IL1F10Q8WWZ1 152 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 KIR3DX1Q9H7L2 352 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ISG20L2Q9H9L3 353 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 KCNMB2Q9Y691 235 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 F13BP05160 661 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 DANCRP0C864 163 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 LIM2P55344 173 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 NTHL1P78549 312 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 SRSF5Q13243 272 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF506Q5JVG8 444 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 CLEC18BQ6UXF7 455 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR10G4Q8NGN3 311 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 GTF3AQ92664 365 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 GALNT14Q96FL9 552 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 CDCP1Q9H5V8 836 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 C5AR2Q9P296 337 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF860A6NHJ4 632 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 AQP7P3A6NL99 342 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ADM5C9JUS6 153 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A26D6RGX4 464 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 YPEL5P62699 121 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 HNRNPA1L2Q32P51 320 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 SPATA45Q537H7 98 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 CARD17Q5XLA6 110 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR10G9Q8NGN4 311 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR10G7Q8NGN6 311 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PIPOXQ9P0Z9 390 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 RBPJLQ9UBG7 517 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 DSPPQ9NZW4 1301 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1W2PNV4 684 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR2T8A6NH00 312 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 DLEU1O43261 78 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ERHP84090 104 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 CPEB2Q7Z5Q1 589 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR11G2Q8NGC1 345 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ALKBH7Q9BT30 221 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PSMG3Q9BT73 122 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PBOV1Q9GZY1 135 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM30AQ9NV96 361 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 TECRQ9NZ01 308 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF256Q9Y2P7 627 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 RGPD1P0DJD0 1748 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 C19orf67A6NJJ6 358 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 F2RP25116 425 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 CTSOP43234 321 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 SLC37A1P57057 533 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 DPTQ07507 201 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 FUT7Q11130 342 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM52BQ4KMG9 183 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms