RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CCDC90BQ9GZT6 254 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 UFSP2Q9NUQ7 469 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 ZNF391Q9UJN7 358 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 BLOC1S6Q9UL45 172 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 CMYA5Q8N3K9 4069 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 MGAM2Q2M2H8 2515 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 A0A1B0GVI7 797 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 LOC107986453A0A1B0GWG9 222 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 ANKRD30BLA7E2S9 258 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 RGS10O43665 173 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 PPIAL4GP0DN37 164 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 ACKR3P25106 362 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 GTF2A1P52655 376 aaPredicted RBP10.75□□□□□ -0.69
TSC2-220ENST00000568238 PAX2Q02962 417 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 PAX8Q06710 450 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 OR8B8Q15620 311 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 XAF1Q6GPH4 301 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 FDX2Q6P4F2 183 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 DCDC5Q6ZRR9 648 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 RDH10Q8IZV5 341 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 C3orf56Q8N813 242 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 PAPOLGQ9BWT3 736 aaKnown RBP10.75□□□□□ -0.69
TSC2-220ENST00000568238 DUSP21Q9H596 190 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 FN3KRPQ9HA64 309 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 MRPL15Q9P015 296 aaKnown RBP10.75□□□□□ -0.69
TSC2-220ENST00000568238 FRRS1LQ9P0K9 344 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 CLN8Q9UBY8 286 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 ZNF69Q9UC07 566 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 ERGIC3Q9Y282 383 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 RHBDD3Q9Y3P4 386 aa10.75□□□□□ -0.69
TSC2-220ENST00000568238 A0A1B0GTI1 187 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 DNAJC9-AS1A6NH13 148 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 SYT7O43581 403 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 GMDSO60547 372 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 LALBAP00709 142 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 IGLV3-1P01715 115 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 UBCP0CG48 685 aaKnown RBP10.74□□□□□ -0.69
TSC2-220ENST00000568238 FAHP16930 419 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 CD80P33681 288 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 DDOSTP39656 456 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 MRPL28Q13084 256 aaKnown RBP10.74□□□□□ -0.69
TSC2-220ENST00000568238 ALKBH1Q13686 389 aaKnown RBP10.74□□□□□ -0.69
TSC2-220ENST00000568238 DOC2BQ14184 412 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 MPPED2Q15777 294 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 KCNJ8Q15842 424 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 TUSC1Q2TAM9 212 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 ZNF676Q8N7Q3 588 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 ZFP41Q8N8Y5 198 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 C19orf18Q8NEA5 215 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 RAB40AQ8WXH6 277 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 MND1Q9BWT6 205 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 CDCA4Q9BXL8 241 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 PPP1R3EQ9H7J1 279 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 ZMAT3Q9HA38 289 aaKnown RBP10.74□□□□□ -0.69
TSC2-220ENST00000568238 TRIM36Q9NQ86 728 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 BABAM2Q9NXR7 383 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 RNF7Q9UBF6 113 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 PIGLQ9Y2B2 252 aa10.74□□□□□ -0.69
TSC2-220ENST00000568238 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 TRBV2A0A0J9YWF9 115 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 PNMA8CA0A1B0GUJ8 204 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 OR4C45A6NMZ5 311 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 MTRF1O75570 445 aaKnown RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 DHRS3O75911 302 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 PTBP3O95758 552 aaKnown RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 IGHV4-38-2P0DP08 117 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 GNALP38405 381 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 MAP2K4P45985 399 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 MAP2K3P46734 347 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 TGM4P49221 684 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 CCR9P51686 369 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 WNT4P56705 351 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 MZT1Q08AG7 82 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 CDK5R1Q15078 307 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 EGFL6Q8IUX8 553 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 BCL6BQ8N143 479 aaPredicted RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 FTMTQ8N4E7 242 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 NANOGP1Q8N7R0 232 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 PLPP7Q8NBV4 271 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 ZNF485Q8NCK3 441 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 CSNK2A3Q8NEV1 391 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 OR10AC1Q8NH08 325 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 OR5AK2Q8NH90 309 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 HAVCR2Q8TDQ0 301 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 DACT3Q96B18 629 aaPredicted RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 UPRTQ96BW1 309 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 PDCD1LG2Q9BQ51 273 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 NUDT16L1Q9BRJ7 211 aaKnown RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 MS4A7Q9GZW8 240 aaPredicted RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 PLEKHA1Q9HB21 404 aa10.73□□□□□ -0.69
TSC2-220ENST00000568238 SIRT4Q9Y6E7 314 aaPredicted RBP10.73□□□□□ -0.69
TSC2-220ENST00000568238 IGHV3OR16-10A0A075B7F0 116 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 KIR2DS1A0A191URI9 304 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 hCG_1807616A0A1W2PRN6 198 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 A6NIN4 97 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 A6NLC8 198 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 ZNF850A8MQ14 1090 aa10.72□□□□□ -0.69
TSC2-220ENST00000568238 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms